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Computers in Biology and Medicine, Volume 180
Volume 180, 2024
- Chengye Li, Hanbin Chen, Xiaojian Chen, Peizhen Wang, Yunjiao Shi, Xiaona Xie, Yanfan Chen, Xueding Cai:
Identification of inflammatory response-related molecular mechanisms based on the ATM/ATR/p53 pathway in tumor cells. 108776 - Zhanshan (Sam) Ma:
Metagenome comparison (MC): A new framework for detecting unique/enriched OMUs (operational metagenomic units) derived from whole-genome sequencing reads. 108852 - Junru Ren, Zhizhong Zheng, Yizhong Wang, Ningning Liang, Shaoyu Wang, Ailong Cai, Lei Li, Bin Yan:
Prior image-based generative adversarial learning for multi-material decomposition in photon counting computed tomography. 108854 - Fengming Ni, Xinmin Liu, Shaokun Wang:
Impact of negative emotions and insomnia on sepsis: A mediation Mendelian randomization study. 108858 - Stavros I. Dimitriadis:
ℛSCZ: A Riemannian schizophrenia diagnosis framework based on the multiplexity of EEG-based dynamic functional connectivity patterns. 108862 - Seungyeon Choi, Sangmin Seo, Byung Ju Kim, Chihyun Park, Sanghyun Park:
PIDiff: Physics informed diffusion model for protein pocket-specific 3D molecular generation. 108865 - Marina Pérez-Aliacar, Jacobo Ayensa-Jiménez, Teodora Randelovic, Ignacio Ochoa, Manuel Doblaré:
Modelling glioblastoma resistance to temozolomide. A mathematical model to simulate cellular adaptation in vitro. 108866 - Wenqi Qiu, Song Zhang, Wei Yu, Jian Liu, Huiling Wu:
Non-coding RNAs in hepatocellular carcinoma metastasis: Remarkable indicators and potential oncogenic mechanism. 108867 - Zhiheng Zhou, Qi Wang, Xiaoyu An, Siwei Chen, Yongan Sun, Guanghui Wang, Guiying Yan:
A novel graph neural network method for Alzheimer's disease classification. 108869 - Jinlin Xiang, Bozhao Qi, Marc Cerou, Wei Zhao, Qi Tang:
DN-ODE: Data-driven neural-ODE modeling for breast cancer tumor dynamics and progression-free survivals. 108876 - Hiroki Oka, Daisuke Kawahara, Yuji Murakami:
Radiomics-based prediction of recurrence for head and neck cancer patients using data imbalanced correction. 108879 - Francisco M. García-Moreno, Jesús Ruiz-Espigares, Miguel A. Gutiérrez-Naranjo, Juan Antonio Marchal:
Using deep learning for predicting the dynamic evolution of breast cancer migration. 108890 - Sofia Botti, Chiara Bartolucci, Claudia Altomare, Michelangelo Paci, Lucio Barile, Rolf Krause, Luca Franco Pavarino, Stefano Severi:
A novel ionic model for matured and paced atrial-like human iPSC-CMs integrating IKur and IKCa currents. 108899 - Ruoyou Wu, Cheng Li, Juan Zou, Yong Liang, Shanshan Wang:
Model-based federated learning for accurate MR image reconstruction from undersampled k-space data. 108905 - Bogyu Park, Hyeon-Gyu Chi, Jihyun Lee, Bokyung Park, Jiwon Lee, Soyeon Shin, Woo Jin Hyung, Min-Kook Choi:
Non-relevant segment recognition via hard example mining under sparsely distributed events. 108906 - João Cálem, Catarina Moreira, Joaquim Jorge:
Intelligent systems in healthcare: A systematic survey of explainable user interfaces. 108908 - Venumaheswar Rao Bondala, Ashoka Reddy Komalla:
An efficient model for extracting respiratory and blood oxygen saturation data from photoplethysmogram signals by removing motion artifacts using heuristic-aided ensemble learning model. 108911 - Zahra Ziaastani, Behjat Kalantari-Khandani, Mohammad-Javad Niazi, Ali Kazemipour:
Identification of critical genes and metabolic pathways in rheumatoid arthritis and osteoporosis toward drug repurposing. 108912 - Eric C. Havenhill, Soham Ghosh:
Optimization-based synthesis with directed cell migration. 108915 - Jayant Mahawar, Angshuman Paul:
Generalizable diagnosis of chest radiographs through attention-guided decomposition of images utilizing self-consistency loss. 108922 - Hocine Kadi, Marzena Kawczynski, Sara Bendjama, Jesus Zegarra Flores, Audrey Leong-Hoi, Hugues de Lastic, Julien Balbierer, Claire Mabileau, Jean-Pierre Radoux, Bruno Grollemund, Jean Jaegle, Christophe Guébert, Bertrand Bisch, Agnès Bloch-Zupan:
i-Dent: A virtual assistant to diagnose rare genetic dental diseases. 108927 - Fabien Courreges, Boris Melloni, Joseph Absi:
Design and comparison of computationally efficient uniaxial stress-strain models of the lung parenchyma for real-time applications. 108928 - Jisun Kim, Jung Jin Kim:
Computationally efficient dominant load-based local bone microstructure reconstruction method using topology optimization. 108929 - Juanjuan Qin, Dong Pei, Qian Guo, Xingjuan Cai, Liping Xie, Wensheng Zhang:
Intersection-union dual-stream cross-attention Lova-SwinUnet for skin cancer hair segmentation and image repair. 108931 - Pengfei Zhang, Yuanzhi Cheng, Shinichi Tamura:
Shape prior-constrained deep learning network for medical image segmentation. 108932 - Xutao Guo, Yang Xiang, Yanwu Yang, Chenfei Ye, Yue Yu, Heather Ting Ma:
Accelerating denoising diffusion probabilistic model via truncated inverse processes for medical image segmentation. 108933 - Mariam Al Harrach, Maxime Yochum, G. Ruffini, Fabrice Bartolomei, Fabrice Wendling, Pascal Benquet:
NeoCoMM: A neocortical neuroinspired computational model for the reconstruction and simulation of epileptiform events. 108934 - Manpreet Singh, Jaques Reifman, Jose E. Rubio:
A 3-D whole-body human thermoregulatory model to simulate cold-induced vasodilation in the hands and feet. 108935 - Valentin Demeusy, Florent Roche, Fabrice Vincent, May Taha, Ruiting Zhang, Eric Jouvent, Hugues Chabriat, Jessica Lebenberg:
Development and validation of a two-stage convolutional neural network algorithm for segmentation of MRI white matter hyperintensities for longitudinal studies in CADASIL. 108936 - Zili Dai, Baisheng Lin, Yongxin Cao, Li Wang, Kai Liao, Liyi Guo, Jian Zhang:
Melatonin reverses EGFR-TKI therapeutic resistance by modulating crosstalk between circadian-related gene signature and immune infiltration patterns in patients with COVID-19 and lung adenocarcinoma. 108937 - Thomas Stocker, Andrea Wichelhaus, Uwe Baumert, Mila Janjic Rankovic, Corinna Lesley Seidel, Hisham Sabbagh:
Torque expression of superelastic NiTi V-Slot and conventional stainless steel orthodontic bracket-archwire combinations - A finite element analysis. 108938 - Bicao Li, Jing Wang, Bei Wang, Zhuhong Shao, Wei Li, Jie Huang, Panpan Li:
BMCS-Net: A Bi-directional multi-scale cascaded segmentation network based on transformer-guided feature Aggregation for medical images. 108939 - Cecilia Engels, Jori Kern, Zdenka Dudová, Noemi Deppenwiese, Alexander Kiel, Björn Kroll, Tobias Kussel, Christina Schüttler, Radovan Tomásik, Michael Hummel, Martin Breu, David Croft, Christoph Dolch, Petra Duhm-Harbeck, Lars Ebert, Cäcilia Engels, Ann-Kristin Kock-Schoppenhauer, John Linde, Christian Maier, Michael Neumann, Matthias Öfelein, Matthias Rambow, Susanne Sahr, Florian Stampe, Deniz Tas, Hannes Ulrich, Martin Lablans, Hans-Ulrich Prokosch:
The sample locator: A federated search tool for biosamples and associated data in Europe using HL7 FHIR. 108941 - Ruijie Wang, Sicheng Yang, Qiling Li, Dexing Zhong:
CytoGAN: Unpaired staining transfer by structure preservation for cytopathology image analysis. 108942 - David Carneros-Prado, Cosmin C. Dobrescu, Luis Cabañero, Laura Villa, Yulith V. Altamirano-Flores, Irvin Hussein López-Nava, Iván González, Jesús Fontecha, Ramón Hervás:
Synthetic 3D full-body skeletal motion from 2D paths using RNN with LSTM cells and linear networks. 108943 - Julius Åkesson, Johannes Töger, Einar Heiberg:
Random effects during training: Implications for deep learning-based medical image segmentation. 108944 - Chittathuru Himala Praharsha, Alwin Poulose:
CBAM VGG16: An efficient driver distraction classification using CBAM embedded VGG16 architecture. 108945 - Xiyuan Wang, Zhancheng Zhang, Shaokang Xu, Xiaoqing Luo, Baocheng Zhang, Xiaojun Wu:
Contrastive learning based method for X-ray and CT registration under surgical equipment occlusion. 108946 - Shijie Xu, Yufeng Chen, Shukai Yang, Xiaoqian Zhang, Feng Sun:
FCSU-Net: A novel full-scale Cross-dimension Self-attention U-Net with collaborative fusion of multi-scale feature for medical image segmentation. 108947 - Xinhao Bai, Hongpeng Wang, Yanding Qin, Jianda Han, Ningbo Yu:
MatchMorph: A real-time pre- and intra-operative deformable image registration framework for MRI-guided surgery. 108948 - Michael Neumann, Hardik Kothare, Vikram Ramanarayanan:
Multimodal speech biomarkers for remote monitoring of ALS disease progression. 108949 - Tong Min Kim, Junhyeok Son, Ji-Won Chun, Youngrong Lee, Dai-Jin Kim, In-Young Choi, Taehoon Ko, Seungjin Choi:
Comparison of AI with and without hand-crafted features to classify Alzheimer's disease in different languages. 108950 - Tianming Cai, Guoying Zhao, Junbin Zang, Chen Zong, Zhidong Zhang, Chenyang Xue:
Quantifying instability in neurological disorders EEG based on phase space DTM function. 108951 - Hangsik Shin:
Signal completion using generative adversarial networks for enhanced photoplethysmography measurement accuracy. 108952 - Giada Ciardullo, Carla Orlando, Nino Russo, Emanuela Marchese, Annia Galano, Tiziana Marino, Mario Prejanò:
On the dual role of (+)-catechin as primary antioxidant and inhibitor of viral proteases. 108953 - Hamid Irannejad, Mehdi Valipour:
Cheminformatics analysis of indoleamine and tryptophan 2,3-dioxygenase inhibitors: A descriptor and fingerprint based machine learning approach to disclose selectivity measures. 108954 - Alba Gomez-Valadés, Rafael Martínez-Tomás, Mariano Rincón:
Designing an effective semantic fluency test for early MCI diagnosis with machine learning. 108955 - Anh Pham, Maxim E. Edelson, Armin Nouri, Tsung-Ting Kuo:
Distributed management of patient data-sharing informed consents for clinical research. 108956 - Yu Xuan Teo, Rui En Lee, Surya Girinatha Nurzaman, Chee Pin Tan, Ping Yi Chan:
Action tremor features discovery for essential tremor and Parkinson's disease with explainable multilayer BiLSTM. 108957 - Ruohua Zhu, Haiyang He, Yuzhe Chen, Ming Yi, Shengdong Ran, Chengde Wang, Yi Wang:
Deep learning for rapid virtual H&E staining of label-free glioma tissue from hyperspectral images. 108958 - Yuri G. Rykov, Kok Pin Ng, Michael D. Patterson, Bikram A. Gangwar, Nagaendran Kandiah:
Predicting the severity of mood and neuropsychiatric symptoms from digital biomarkers using wearable physiological data and deep learning. 108959 - M. T. Cabeleira, D. Vijay Anand, S. Ray, C. Black, N. C. Ovenden, V. Díaz-Zuccarini:
Comparing physiological impacts of positive pressure ventilation versus self-breathing via a versatile cardiopulmonary model incorporating a novel alveoli opening mechanism. 108960 - Marco Soares dos Santos, Rodrigo M. C. Bernardo, Joãov. Vidal, Ana Moreira, Delfim F. M. Torres, Carlos A. R. Herdeiro, Hélder A. Santos, Gil Gonçalves:
Next-generation chemotherapy treatments based on black hole algorithms: From cancer remission to chronic disease management. 108961 - Ajmeera Kiran, Janjhyam Venkata Naga Ramesh, Irfan Sadiq Rahat, Mohammad Aman Ullah Khan, Anwar Hossain, Roise Uddin:
Advancing breast ultrasound diagnostics through hybrid deep learning models. 108962 - Javier Cervera, J. A. Manzanares, Michael Levin, Salvador Mafe:
Oscillatory phenomena in electrophysiological networks: The coupling between cell bioelectricity and transcription. 108964 - Datao Xu, Huiyu Zhou, Meizi Wang, Xin Ma, Gusztáv Fekete, TeoEe Chon, Justin Fernandez, Julien S. Baker, Yaodong Gu:
Contribution of ankle motion pattern during landing to reduce the knee-related injury risk. 108965 - Joseline Heuer, Rene Krenz-Baath, Roman Obermaisser:
Human-heart-model for hardware-in-the-loop testing of pacemakers. 108966 - Maikel Maciel Rönnau, Tatiana W. Lepper, Igor C. Guedes, Ana L. F. Espinosa, Pantelis V. Rados, Manuel M. Oliveira:
Automatic segmentation and classification of Papanicolaou-stained cells and dataset for oral cancer detection. 108967 - Shiwen Cao, Zhaoyu Hu, Xuan Xie, Yuanyuan Wang, Jinhua Yu, Bojie Yang, Zhifeng Shi, Guoqing Wu:
Integrated diagnosis of glioma based on magnetic resonance images with incomplete ground truth labels. 108968 - Emadeldin M. Kamel, Faris F. Aba Alkhayl, Haifa A. Alqhtani, May Bin-Jumah, Hassan A. Rudayni, Al Mokhtar Lamsabhi:
Dissecting molecular mechanisms underlying the inhibition of β-glucuronidase by alkaloids from Hibiscus trionum: Integrating in vitro and in silico perspectives. 108969 - Saja Gharaba, Aviv Shalem, Omri Paz, Noam Muchtar, Lior Wolf, Miguel Weil:
Aberrant migration features in primary skin fibroblasts of Huntington's disease patients hold potential for unraveling disease progression using an image based machine learning tool. 108970 - Ercan Gürsoy, Yasin Kaya:
Brain-GCN-Net: Graph-Convolutional Neural Network for brain tumor identification. 108971 - Yingwei Yang, Haiguang Huang, Yingsheng Shao, Beilei Chen:
DAC-Net: A light-weight U-shaped network based efficient convolution and attention for thyroid nodule segmentation. 108972 - Qi Zhang, Yuxiao Wei, Liwei Liu:
GraphPro: An interpretable graph neural network-based model for identifying promoters in multiple species. 108974 - Aneesh R. P, Joseph Zacharias:
Semantic segmentation in skin surface microscopic images with artifacts removal. 108975 - Benedetta Fantaci, Begoña Calvo, José Félix Rodríguez:
Modeling biological growth of human keratoconus: On the effect of tissue degradation, location and size. 108976 - Bowen Zhang, Xi Chen, Wang Qin, Liang Ge, Xiaolong Zhang, Guanghong Ding, Shengzhang Wang:
Enhancing cerebral arteriovenous malformation analysis: Development and application of patient-specific lumped parameter models based on 3D imaging data. 108977 - Navamayooran Thavanesan, Arya Farahi, Charlotte Parfitt, Zehor Belkhatir, Tayyaba Azim, Elvira Perez Vallejos, Zoë Walters, Sarvapali D. Ramchurn, Timothy J. Underwood, Ganesh Vigneswaran:
Insights from explainable AI in oesophageal cancer team decisions. 108978 - Qi Yu, Qian Ma, Lijuan Da, Jiahui Li, Mengying Wang, Andi Xu, Zilin Li, Wenyuan Li:
A transformer-based unified multimodal framework for Alzheimer's disease assessment. 108979 - Laquan Li, Chuangbo Jiang, Lei Yu, Xianhua Zeng, Shenhai Zheng:
Efficient model-informed co-segmentation of tumors on PET/CT driven by clustering and classification information. 108980 - Zenan Wang, Ming Liu, Jue Jiang, Xiaolei Qu:
Colorectal polyp segmentation with denoising diffusion probabilistic models. 108981 - Covadonga Diez Sanmartin, Antonio Sarasa Cabezuelo, Amado Andrés Belmonte:
Ensemble of machine learning techniques to predict survival in kidney transplant recipients. 108982 - Marwa M. Emam, Essam H. Houssein, Nagwan M. Abdel Samee, Amal Khalifa Alkhalifa, Mosa E. Hosney:
Optimizing cancer diagnosis: A hybrid approach of genetic operators and Sinh Cosh Optimizer for tumor identification and feature gene selection. 108984 - Mengling Wang, Yongkang Wang, Lin He, Ju Huang, Yanying Tan, Wen Zhang, Zhinan Mei, Hui Xiong:
AI-driven determination of active compounds and investigation of multi-pharmacological effects of Chrysanthemi Flos. 108985 - Marion Taconné, Virginie Le Rolle, Elena Galli, Kimi P. Owashi, Adrien Al Wazzan, Erwan Donal, Alfredo I. Hernández:
Characterization of cardiac resynchronization therapy response through machine learning and personalized models. 108986 - Nida Andlib, Sneh Prabha, Sonu Chand Thakur:
Unraveling the molecular pathogenesis of Type 2 Diabetes and its impact on female infertility: A bioinformatics and systems biology approach. 108987 - Wenbo Xu, Shuai Liu, Longtu Ma, Long Cheng, Qingchao Li, Liangliang Qing, Yongjin Yang, Zhilong Dong:
Identification of miRNA signature in cancer-associated fibroblast to predict recurrent prostate cancer. 108989 - Xi Zhou, Xinxin Wang, Haiqin Ma, Jianjian Zhang, Xiaomei Wang, Xiuxiu Bai, Li Zhang, Jia Long, Jiakuan Chen, Hongbo Le, Wenjie He, Shen Zhao, Jun Xia, Guang Yang:
Customized T-time inner sampling network with uncertainty-aware data augmentation strategy for multi-annotated lesion segmentation. 108990 - Soumya Mitra, Amit Kumar Halder, Arup Koley, Nilanjan Ghosh, Parthasarathi Panda, Subhash C. Mandal, M. Natália Dias Soeiro Cordeiro:
Unveiling structural determinants for FXR antagonism in 1,3,4-trisubstituted-Pyrazol amide derivatives: A multi-scale in silico modelling approach. 108991 - Rafik Menacer, Saad Bouchekioua, Saida Meliani, Nadjah Belattar:
New combined Inverse-QSAR and molecular docking method for scaffold-based drug discovery. 108992 - Soemwit Khongwichit, Aekkaraj Nualla-ong, Napat Prompat, Maliwan Amatatongchai, Peter A. Lieberzeit, Suticha Chunta:
Computational and experimental investigations of a novel aptamer targeting oxidized low-density lipoprotein. 108994 - Harry Rubin-Falcone, Joyce M. Lee, Jenna Wiens:
Learning control-ready forecasters for Blood Glucose Management. 108995 - Zhilei Zhao, Shuli Guo, Lina Han, Lei Wu, Yating Zhang, Biyu Yan:
Altruistic seagull optimization algorithm enables selection of radiomic features for predicting benign and malignant pulmonary nodules. 108996 - Hamid Ghaderi, Brandon Foreman, Chandan K. Reddy, Vignesh Subbian:
Discovery of generalizable TBI phenotypes using multivariate time-series clustering. 108997 - Chenbin Chen, Xietao Chen, Yuanbo Hu, Bujian Pan, Qunjia Huang, Qiantong Dong, Xiangyang Xue, Xian Shen, Xiaodong Chen:
Utilizing machine learning to integrate single-cell and bulk RNA sequencing data for constructing and validating a novel cell adhesion molecules related prognostic model in gastric cancer. 108998 - Jorge Paz-Ruza, Alex Alves Freitas, Amparo Alonso-Betanzos, Bertha Guijarro-Berdiñas:
Positive-Unlabelled learning for identifying new candidate Dietary Restriction-related genes among ageing-related genes. 108999 - Sajal Kumar Babu Degala, Ravi Prakash Tewari, Pankaj Kamra, Uvanesh Kasiviswanathan, Ramesh Pandey:
Segmentation and Estimation of Fetal Biometric Parameters using an Attention Gate Double U-Net with Guided Decoder Architecture. 109000 - Daniele Spoladore, Francesco Stella, Martina Tosi, Erna Cecilia Lorenzini, Claudio Bettini:
A knowledge-based decision support system to support family doctors in personalizing type-2 diabetes mellitus medical nutrition therapy. 109001 - RuiZi Zhang, Yue Sun, Yifan Chen:
Enhancing targeted tumor treatment: A novel fuzzy logic framework for precision drug delivery strategy selection. 109008 - Hong Liu, Yuzhou Zhuang, Enmin Song, Yongde Liao, Guanchao Ye, Fan Yang, Xiangyang Xu, Xvhao Xiao, Chih-Cheng Hung:
A 3D boundary-guided hybrid network with convolutions and Transformers for lung tumor segmentation in CT images. 109009 - Yue Hao, Claudia Tersteeg, Alfons G. Hoekstra, Gábor Závodszky:
The effect of flow-derived mechanical cues on the growth and morphology of platelet aggregates under low, medium, and high shear rates. 109010 - Reham R. Mostafa, Ahmed M. Khedr, Zaher Al Aghbari, Imad Afyouni, Ibrahim Kamel, Naveed Ahmed:
Medical image segmentation approach based on hybrid adaptive differential evolution and crayfish optimizer. 109011 - Xiaoqing Cheng, Xixin Yang, Yuanlin Guan, Yihan Feng:
ERT-GFAN: A multimodal drug-target interaction prediction model based on molecular biology and knowledge-enhanced attention mechanism. 109012 - Jianda Yue, Jiawei Xu, Tingting Li, Yaqi Li, Zihui Chen, Songping Liang, Zhonghua Liu, Ying Wang:
Discovery of potential antidiabetic peptides using deep learning. 109013 - Umair Khan, Russell Thompson, Jason Li, Lauren P. Etter, Ingrid Camelo, Rachel C. Pieciak, Ilse Castro-Aragon, Bindu Setty, Christopher C. Gill, Libertario Demi, Margrit Betke:
FLUEnT: Transformer for detecting lung consolidations in videos using fused lung ultrasound encodings. 109014 - Jijo Derick Abraham, Sheikh Mohammad Shavik, Travis Mitchell, Lik Chuan Lee, Bahni Ray, Christopher R. Leonardi:
Computational investigation of the role of ventricular remodelling in HFpEF: The key to phenotype dissection. 109019 - Pablo Jeken-Rico, Yves Chau, Aurèle Goetz, Vincent Lannelongue, Jacques Sédat, Elie Hachem:
Virtual flow diverter deployment and embedding for hemodynamic simulations. 109023 - Haiwen Chen, Zhiyuan Qu, Yuan Tian, Ning Jiang, Yuan Qin, Jie Gao, Ruoyan Zhang, Yanning Ma, Zuolin Jin, Guangtao Zhai:
A cross-temporal multimodal fusion system based on deep learning for orthodontic monitoring. 109025 - Alessandro Boaro, Alberto Azzari, Federica Basaldella, Sonia Nunes, Alberto Feletti, Manuele Bicego, Francesco Sala:
Machine learning allows expert level classification of intraoperative motor evoked potentials during neurosurgical procedures. 109032
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