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2020 – today
- 2024
[j49]Manpreet Singh
, Jaques Reifman, Jose E. Rubio:
A 3-D whole-body human thermoregulatory model to simulate cold-induced vasodilation in the hands and feet. Comput. Biol. Medicine 180: 108935 (2024)- 2023
- [j48]Junfei Tong, Adhitya V. Subramani, Vivek Kote, Michael Baggaley, W. Brent Edwards, Jaques Reifman:
Effects of Stature and Load Carriage on the Running Biomechanics of Healthy Men. IEEE Trans. Biomed. Eng. 70(8): 2445-2453 (2023) - 2022
- [j47]Ruifeng Liu, Srinivas Laxminarayan, Jaques Reifman, Anders Wallqvist:
Enabling data-limited chemical bioactivity predictions through deep neural network transfer learning. J. Comput. Aided Mol. Des. 36(12): 867-878 (2022) - [j46]Sidhartha Chaudhury, Chenggang Yu, Ruifeng Liu, Kamal Kumar, Samantha Hornby, Christopher Duplessis, Joel M. Sklar, Judith E. Epstein, Jaques Reifman:
Wearables Detect Malaria Early in a Controlled Human-Infection Study. IEEE Trans. Biomed. Eng. 69(6): 2119-2129 (2022) - 2020
- [j45]Chun Xu, Jaques Reifman, Michael Baggaley, W. Brent Edwards, Ginu Unnikrishnan:
Individual Differences in Women During Walking Affect Tibial Response to Load Carriage: The Importance of Individualized Musculoskeletal Finite-Element Models. IEEE Trans. Biomed. Eng. 67(2): 545-555 (2020)
2010 – 2019
- 2019
- [j44]Fabio Ferrarelli, Rachel Kaskie, Srinivas Laxminarayan, Sridhar Ramakrishnan, Jaques Reifman, Anne Germain:
An increase in sleep slow waves predicts better working memory performance in healthy individuals. NeuroImage 191: 1-9 (2019) - 2017
- [j43]Chenggang Yu, Hyung Jun Woo, Xueping Yu, Tatsuya Oyama, Anders Wallqvist, Jaques Reifman:
A strategy for evaluating pathway analysis methods. BMC Bioinform. 18(1): 453:1-453:11 (2017) - 2016
- [j42]Vesna Memisevic, Kamal Kumar, Nela Zavaljevski, David DeShazer, Anders Wallqvist, Jaques Reifman:
DBSecSys 2.0: a database of Burkholderia mallei and Burkholderia pseudomallei secretion systems. BMC Bioinform. 17: 387 (2016) - [j41]Anders Wallqvist, Xin Fang, Shivendra G. Tewari, Ping Ye, Jaques Reifman:
Metabolic host responses to malarial infection during the intraerythrocytic developmental cycle. BMC Syst. Biol. 10: 58 (2016) - 2015
- [j40]Vesna Memisevic, Nela Zavaljevski, Seesandra V. Rajagopala, Keehwan Kwon, Rembert Pieper, David DeShazer, Jaques Reifman, Anders Wallqvist:
Mining Host-Pathogen Protein Interactions to Characterize Burkholderia mallei Infectivity Mechanisms. PLoS Comput. Biol. 11(3) (2015) - [j39]Francisco G. Vital-Lopez, Jaques Reifman, Anders Wallqvist:
Biofilm Formation Mechanisms of Pseudomonas aeruginosa Predicted via Genome-Scale Kinetic Models of Bacterial Metabolism. PLoS Comput. Biol. 11(10) (2015) - [j38]Sridevi Nagaraja, Jaques Reifman, Alexander Yu. Mitrophanov:
Computational Identification of Mechanistic Factors That Determine the Timing and Intensity of the Inflammatory Response. PLoS Comput. Biol. 11(12) (2015) - [j37]Srinivas Laxminarayan, Mark J. Buller, William J. Tharion, Jaques Reifman:
Human Core Temperature Prediction for Heat-Injury Prevention. IEEE J. Biomed. Health Informatics 19(3): 883-891 (2015) - 2014
- [j36]Ruifeng Liu, Narender Singh, Gregory J. Tawa, Anders Wallqvist, Jaques Reifman:
Exploiting large-scale drug-protein interaction information for computational drug repurposing. BMC Bioinform. 15: 210 (2014) - [j35]Vesna Memievi, Kamal Kumar, Li Cheng, Nela Zavaljevski, David DeShazer, Anders Wallqvist, Jaques Reifman:
DBSecSys: a database of Burkholderia mallei secretion systems. BMC Bioinform. 15: 244 (2014) - [j34]Bora Sul, Anders Wallqvist, Michael J. Morris, Jaques Reifman, Vineet Rakesh:
A computational study of the respiratory airflow characteristics in normal and obstructed human airways. Comput. Biol. Medicine 52: 130-143 (2014) - [c15]Jianbo Liu, Andrew T. Reisner, Shwetha Edla, Jaques Reifman:
A comparison of alerting strategies for hemorrhage identification during prehospital emergency transport. EMBC 2014: 2670-2673 - [c14]Jason B. Smith, Andrew T. Reisner, Shwetha Edla, Jianbo Liu, Stephanie Liddle, Jaques Reifman:
A platform for real-time acquisition and analysis of physiological data in hospital emergency departments. EMBC 2014: 2678-2681 - [c13]Xiaoxiao Chen, Andrew T. Reisner, Liangyou Chen, Shwetha Edla, Jaques Reifman:
The matching of sinus arrhythmia to respiration: Are trauma patients without serious injury comparable to healthy laboratory subjects? EMBC 2014: 3398-3401 - 2013
- [j33]Vesna Memievi, Anders Wallqvist, Jaques Reifman:
Reconstituting protein interaction networks using parameter-dependent domain-domain interactions. BMC Bioinform. 14: 154 (2013) - [j32]Francisco G. Vital-Lopez, Anders Wallqvist, Jaques Reifman:
Bridging the gap between gene expression and metabolic phenotype via kinetic models. BMC Syst. Biol. 7: 63 (2013) - 2012
- [j31]Xueping Yu, Anders Wallqvist, Jaques Reifman:
Inferring high-confidence human protein-protein interactions. BMC Bioinform. 13: 79 (2012) - [j30]Chenggang Yu, Valmik Desai, Li Cheng, Jaques Reifman:
QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence. BMC Bioinform. 13: 143 (2012) - [j29]Hyung-June Woo, Ravi Vijaya Satya, Jaques Reifman:
Thermodynamic Basis for the Emergence of Genomes during Prebiotic Evolution. PLoS Comput. Biol. 8(5) (2012) - [j28]Daniel R. Ripoll, Ilja V. Khavrutskii, Sidhartha Chaudhury, Jin Liu, Robert A. Kuschner, Anders Wallqvist, Jaques Reifman:
Quantitative Predictions of Binding Free Energy Changes in Drug-Resistant Influenza Neuraminidase. PLoS Comput. Biol. 8(8) (2012) - [j27]Xin Fang, Anders Wallqvist, Jaques Reifman:
Modeling Phenotypic Metabolic Adaptations of Mycobacterium tuberculosis H37Rv under Hypoxia. PLoS Comput. Biol. 8(9) (2012) - [j26]Bhaskar Dutta, Anders Wallqvist, Jaques Reifman:
PathNet: A tool for pathway analysis using topological information. Source Code Biol. Medicine 7: 10 (2012) - [c12]Sridhar Ramakrishnan, Srinivas Laxminarayan, David Thorsley, Nancy J. Wesensten, Thomas J. Balkin, Jaques Reifman:
Individualized performance prediction during total sleep deprivation: Accounting for trait vulnerability to sleep loss. EMBC 2012: 5574-5577 - 2011
- [j25]Ravi Vijaya Satya, Nela Zavaljevski, Jaques Reifman:
SNIT: SNP identification for strain typing. Source Code Biol. Medicine 6: 14 (2011) - [c11]Xiaoxiao Chen, Liangyou Chen, Andrew T. Reisner, Jaques Reifman:
Using confidence intervals to assess the reliability of instantaneous heart rate and respiratory rate. EMBC 2011: 6939-6942 - [c10]Yinghui Lu, Srinivasan Rajaraman, W. Kenneth Ward, Robert A. Vigersky, Jaques Reifman:
Predicting human subcutaneous glucose concentration in real time: A universal data-driven approach. EMBC 2011: 7945-7948 - 2010
- [j24]Ravi Vijaya Satya, Kamal Kumar, Nela Zavaljevski, Jaques Reifman:
A high-throughput pipeline for the design of real-time PCR signatures. BMC Bioinform. 11: 340 (2010) - [j23]Xin Fang, Anders Wallqvist, Jaques Reifman:
Development and analysis of an in vivo-compatible metabolic network of Mycobacterium tuberculosis. BMC Syst. Biol. 4: 160 (2010) - [j22]Anders Wallqvist, Nela Zavaljevski, Ravi Vijaya Satya, Rajkumar Bondugula, Valmik Desai, Xin Hu, Kamal Kumar, Michael S. Lee, In-Chul Yeh, Chenggang Yu, Jaques Reifman:
Accelerating Biomedical Research in Designing Diagnostic Assays, Drugs, and Vaccines. Comput. Sci. Eng. 12(5): 46-55 (2010) - [j21]Yinghui Lu, Andrei V. Gribok, W. Kenneth Ward, Jaques Reifman:
The Importance of Different Frequency Bands in Predicting Subcutaneous Glucose Concentration in Type 1 Diabetic Patients. IEEE Trans. Biomed. Eng. 57(8): 1839-1846 (2010) - [j20]Adiwinata Gani, Andrei V. Gribok, Yinghui Lu, W. Kenneth Ward, Robert A. Vigersky, Jaques Reifman:
Universal glucose models for predicting subcutaneous glucose concentration in humans. IEEE Trans. Inf. Technol. Biomed. 14(1): 157-165 (2010) - [j19]Andrei V. Gribok, Mark J. Buller, Reed W. Hoyt, Jaques Reifman:
A real-time algorithm for predicting core temperature in humans. IEEE Trans. Inf. Technol. Biomed. 14(4): 1039-1045 (2010)
2000 – 2009
- 2009
- [j18]Xin Fang, Anders Wallqvist, Jaques Reifman:
A systems biology framework for modeling metabolic enzyme inhibition of Mycobacterium tuberculosis. BMC Syst. Biol. 3: 92 (2009) - [j17]Xueping Yu, Joseph Ivanic, Anders Wallqvist, Jaques Reifman:
A Novel Scoring Approach for Protein Co-Purification Data Reveals High Interaction Specificity. PLoS Comput. Biol. 5(9) (2009) - [j16]Adiwinata Gani, Andrei V. Gribok, Srinivasan Rajaraman, W. Kenneth Ward, Jaques Reifman:
Predicting Subcutaneous Glucose Concentration in Humans: Data-Driven Glucose Modeling. IEEE Trans. Biomed. Eng. 56(2): 246-254 (2009) - 2008
- [j15]Ravi Vijaya Satya, Nela Zavaljevski, Kamal Kumar, Jaques Reifman:
A high-throughput pipeline for designing microarray-based pathogen diagnostic assays. BMC Bioinform. 9 (2008) - [j14]Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth Johnson, Fred J. Stevens, Jaques Reifman:
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation. BMC Bioinform. 9 (2008) - [j13]Shuxing Zhang, Kamal Kumar, Xiaohui Jiang, Anders Wallqvist, Jaques Reifman:
DOVIS: an implementation for high-throughput virtual screening using AutoDock. BMC Bioinform. 9 (2008) - [j12]Joseph Ivanic, Anders Wallqvist, Jaques Reifman:
Evidence of probabilistic behaviour in protein interaction networks. BMC Syst. Biol. 2: 11 (2008) - [j11]Liangyou Chen, Thomas M. McKenna, Andrew T. Reisner, Andrei V. Gribok, Jaques Reifman:
Decision tool for the early diagnosis of trauma patient hypovolemia. J. Biomed. Informatics 41(3): 469-478 (2008) - [j10]Joseph Ivanic, Anders Wallqvist, Jaques Reifman:
Probing the Extent of Randomness in Protein Interaction Networks. PLoS Comput. Biol. 4(7) (2008) - [j9]Andrei V. Gribok, Mark J. Buller, Jaques Reifman:
Individualized Short-Term Core Temperature Prediction in Humans Using Biomathematical Models. IEEE Trans. Biomed. Eng. 55(5): 1477-1487 (2008) - 2007
- [j8]Waibhav Tembe, Nela Zavaljevski, Elizabeth A. Bode, Catherine Chase, Jeanne Geyer, Leonard P. Wasieloski, Gary Benson, Jaques Reifman:
Oligonucleotide fingerprint identification for microarray-based pathogen diagnostic assays. Bioinform. 23(1): 5-13 (2007) - [j7]Nicholas O. Oleng, Andrei V. Gribok, Jaques Reifman:
Error bounds for data-driven models of dynamical systems. Comput. Biol. Medicine 37(5): 670-679 (2007) - [j6]Thomas M. McKenna, Gagandeep Bawa, Kamal Kumar, Jaques Reifman:
The physiology analysis system: An integrated approach for warehousing, management and analysis of time-series physiology data. Comput. Methods Programs Biomed. 86(1): 62-72 (2007) - 2006
- [j5]Chenggang Yu, Zhenqiu Liu, Thomas M. McKenna, Andrew T. Reisner, Jaques Reifman:
Application of Information Technology: A Method for Automatic Identification of Reliable Heart Rates Calculated from ECG and PPG Waveforms. J. Am. Medical Informatics Assoc. 13(3): 309-320 (2006) - [c9]Andrei V. Gribok, Thomas M. McKenna, Jaques Reifman:
Regularization of Body Core Temperature Prediction during Physical Activity. EMBC 2006: 459-463 - 2005
- [c8]Chenggang Yu, Nela Zavaljevski, Fred J. Stevens, Kelly Yackovich, Jaques Reifman:
Classifying noisy protein sequence data: a case study of immunoglobulin light chains. ISMB (Supplement of Bioinformatics) 2005: 495-501 - [c7]Sorin Draghici, Purvesh Khatri, Yanhong Liu, Kitty J. Chase, Elizabeth A. Bode, David A. Kulesh, Leonard P. Wasieloski, David A. Norwood, Jaques Reifman:
Identification of Genomic Signatures for the Design of Assays for the Detection and Monitoring of Anthrax Threats. Pacific Symposium on Biocomputing 2005 - 2004
- [c6]C. Thomas Savell, Maurizio Borsotto, Jaques Reifman, Reed W. Hoyt:
Life Sign Decision Support Algorithms. MedInfo 2004: 1453-1457 - 2003
- [c5]Dechang Chen, Dong Hua, Jaques Reifman, Xiuzhen Cheng:
Gene Selection for Multi-Class Prediction of Microarray Data. CSB 2003: 492-495 - 2002
- [j4]Nela Zavaljevski, Fred J. Stevens, Jaques Reifman:
Support vector machines with selective kernel scaling for protein classification and identification of key amino acid positions. Bioinform. 18(5): 689-696 (2002) - [j3]Jaques Reifman, Earl E. Feldman:
Multilayer perceptron for nonlinear programming. Comput. Oper. Res. 29(9): 1237-1250 (2002) - [j2]Jaques Reifman, Gary R. Gilbert, Lawrence M. Fagan, Richard M. Satava:
White Paper: Military Research Needs in Biomedical Informatics. J. Am. Medical Informatics Assoc. 9(5): 509-519 (2002) - [c4]Reed W. Hoyt, Jaques Reifman, Trinka S. Coster, Mark J. Buller:
Combat medical informatics: present and future. AMIA 2002
1990 – 1999
- 1999
- [c3]Xin Wang, Thomas Y. C. Wei, Jaques Reifman, Lefteri H. Tsoukalas:
Signal Trend Identification with Fuzzy Methods. ICTAI 1999: 332- - [c2]Jaques Reifman, Earl E. Feldman:
Nonlinear programming with feedforward neural networks. IJCNN 1999: 594-598 - 1997
- [j1]Javier E. Vitela, Jaques Reifman:
Premature Saturation in Backpropagation Networks: Mechanism and Necessary Conditions. Neural Networks 10(4): 721-735 (1997) - 1995
- [c1]Jaques Reifman, Thomas Y. C. Wei:
Systematic Construction of Qualitative Physics-Based Rules for Process Diagnostics. EPIA 1995: 311-322
Coauthor Index
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last updated on 2024-09-10 01:12 CEST by the dblp team
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