default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDJianyu Shi
Person information
Other persons with a similar name
SPARQL queries 
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
[j28]Hui Yu
, Wen-Xin Xu, Tian Tan, Zun Liu, Jian-Yu Shi:
Prediction of drug-target binding affinity based on multi-scale feature fusion. Comput. Biol. Medicine 178: 108699 (2024)- [j27]Hui Yu, Jing Wang, Shi-Yu Zhao, Omayo Silver, Zun Liu, JingTao Yao, Jian-Yu Shi:
GGI-DDI: Identification for key molecular substructures by granule learning to interpret predicted drug-drug interactions. Expert Syst. Appl. 240: 122500 (2024) - [j26]Hui Yu, Hui-Xiang Bian, Zi-Ling Chong, Zun Liu, Jian-Yu Shi:
Multi-view clustering with semantic fusion and contrastive learning. Neurocomputing 603: 128264 (2024) - [j25]Ning-Ning Wang, Bei Zhu, Xin-Liang Li, Shao Liu, Jian-Yu Shi, Dong-Sheng Cao:
Comprehensive Review of Drug-Drug Interaction Prediction Based on Machine Learning: Current Status, Challenges, and Opportunities. J. Chem. Inf. Model. 64(1): 96-109 (2024) - [j24]Hui Yu, Jing Wang, Chao Song, Jian-Yu Shi:
Identifying the reaction centers of molecule based on dual-view representation. Knowl. Based Syst. 292: 111606 (2024) - 2023
- [j23]Yue-Hua Feng, Shao-Wu Zhang, Yi-Yang Feng, Qing-Qing Zhang, Ming-Hui Shi, Jian-Yu Shi:
A social theory-enhanced graph representation learning framework for multitask prediction of drug-drug interactions. Briefings Bioinform. 24(1) (2023) - [j22]Xuan Lin, Lichang Dai, Yafang Zhou, Zu-Guo Yu, Wen Zhang, Jian-Yu Shi, Dong-Sheng Cao, Li Zeng, Haowen Chen, Bosheng Song, Philip S. Yu, Xiangxiang Zeng:
Comprehensive evaluation of deep and graph learning on drug-drug interactions prediction. Briefings Bioinform. 24(4) (2023) - [j21]Hui Yu, Kangkang Li, Wenmin Dong, Shuanghong Song, Chen Gao, Jianyu Shi:
Attention-based cross domain graph neural network for prediction of drug-drug interactions. Briefings Bioinform. 24(4) (2023) - [j20]Bing-Xue Du, Yahui Long, Xiaoli Li, Min Wu, Jian-Yu Shi:
CMMS-GCL: cross-modality metabolic stability prediction with graph contrastive learning. Bioinform. 39(8) (2023) - [j19]Jia-Ning Li, Guang Yang, Peng-Cheng Zhao, Xue-Xin Wei, Jian-Yu Shi:
CProMG: controllable protein-oriented molecule generation with desired binding affinity and drug-like properties. Bioinform. 39(Supplement-1): 326-336 (2023) - [j18]Qing-Qing Zhang, Shaowu Zhang, Yue-Hua Feng, Jian-Yu Shi:
Few-Shot Drug Synergy Prediction With a Prior-Guided Hypernetwork Architecture. IEEE Trans. Pattern Anal. Mach. Intell. 45(8): 9709-9725 (2023) - [j17]Hui Yu, KangKang Li, Jianyu Shi:
DGANDDI: Double Generative Adversarial Networks for Drug-Drug Interaction Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 20(3): 1854-1863 (2023) - [c17]Bing-Xue Du, Haoyang Yu, Bei Zhu, Yahui Long, Min Wu, Jian-Yu Shi:
GELKcat: An Integration Learning of Substrate Graph with Enzyme Embedding for Kcat prediction. BIBM 2023: 408-411 - [c16]Bing-Xue Du, Yi Xu, Siu-Ming Yiu, Hui Yu, Jian-Yu Shi:
MTGL-ADMET: A Novel Multi-task Graph Learning Framework for ADMET Prediction Enhanced by Status-Theory and Maximum Flow. RECOMB 2023: 85-103 - [c15]Peizhong Gao, Tanhao Gao, Yanbin Yang, Zhenyuan Liu, Jianyu Shi, Jin Li:
Bamboo Agents: Exploring the Potentiality of Digital Craft by Decoding and Recoding Process. TEI 2023: 15:1-15:13 - [i3]Xuan Lin, Lichang Dai, Yafang Zhou, Zu-Guo Yu, Wen Zhang, Jian-Yu Shi, Dong-Sheng Cao, Li Zeng, Haowen Chen, Bosheng Song, Philip S. Yu, Xiangxiang Zeng:
Comprehensive evaluation of deep and graph learning on drug-drug interactions prediction. CoRR abs/2306.05257 (2023) - [i2]Guoxing Yang, Jianyu Shi, Zan Wang, Xiaohong Liu, Guangyu Wang:
TCM-GPT: Efficient Pre-training of Large Language Models for Domain Adaptation in Traditional Chinese Medicine. CoRR abs/2311.01786 (2023) - 2022
- [j16]Arnold K. Nyamabo, Hui Yu, Zun Liu, Jian-Yu Shi:
Drug-drug interaction prediction with learnable size-adaptive molecular substructures. Briefings Bioinform. 23(1) (2022) - [j15]Yi-Yang Feng, Hui Yu, Yue-Hua Feng, Jian-Yu Shi:
Directed graph attention networks for predicting asymmetric drug-drug interactions. Briefings Bioinform. 23(3) (2022) - [j14]Hui Yu, Shiyu Zhao, Jianyu Shi:
STNN-DDI: a Substructure-aware Tensor Neural Network to predict Drug-Drug Interactions. Briefings Bioinform. 23(4) (2022) - [j13]Zun Liu, Xing-Nan Wang, Hui Yu, Jian-Yu Shi, Wenmin Dong:
Predict multi-type drug-drug interactions in cold start scenario. BMC Bioinform. 23(1): 75 (2022) - [j12]Hui Yu, Wenmin Dong, Jianyu Shi:
RANEDDI: Relation-aware network embedding for drug-drug interaction prediction. Inf. Sci. 582: 167-180 (2022) - [c14]Jianyu Shi, Xiaohong Liu, Guoxing Yang, Guangyu Wang:
Enhanced CT Image Generation by GAN for Improving Thyroid Anatomy Detection. BIBM 2022: 1714-1717 - [c13]Guoxing Yang, Xiaohong Liu, Jianyu Shi, Xianchao Zhang, Guangyu Wang:
AIAT: Adaptive Iteration Adversarial Training for Robust Pulmonary Nodule Detection. BIBM 2022: 2157-2161 - 2021
- [j11]Arnold K. Nyamabo, Hui Yu, Jian-Yu Shi:
SSI-DDI: substructure-substructure interactions for drug-drug interaction prediction. Briefings Bioinform. 22(6) (2021) - [j10]Xiao-Ying Yan, Shaowu Zhang, Siu-Ming Yiu, Jian-Yu Shi:
Interpretable prediction of drug-cell line response by triple matrix factorization. Quant. Biol. 9(4): 426-439 (2021) - [i1]Hui Yu, Shiyu Zhao, Jianyu Shi:
STNN-DDI: A Substructure-aware Tensor Neural Network to Predict Drug-Drug Interactions. CoRR abs/2111.05708 (2021) - 2020
- [j9]Yue-Hua Feng, Shaowu Zhang, Jian-Yu Shi:
DPDDI: a deep predictor for drug-drug interactions. BMC Bioinform. 21(1): 419 (2020)
2010 – 2019
- 2019
- [j8]Jian-Yu Shi, Jia-Xin Li, Kui-Tao Mao, Jiang-Bo Cao, Peng Lei, Hui-Meng Lu, Siu-Ming Yiu:
Predicting combinative drug pairs via multiple classifier system with positive samples only. Comput. Methods Programs Biomed. 168: 1-10 (2019) - [j7]Jian-Yu Shi, Kui-Tao Mao, Hui Yu, Siu-Ming Yiu:
Detecting drug communities and predicting comprehensive drug-drug interactions via balance regularized semi-nonnegative matrix factorization. J. Cheminformatics 11(1): 28:1-28:16 (2019) - 2018
- [j6]Jianyu Shi, Hua Huang, Yan-Ning Zhang, Jiang-Bo Cao, Siu-Ming Yiu:
BMCMDA: a novel model for predicting human microbe-disease associations via binary matrix completion. BMC Bioinform. 19-S(9): 169-176 (2018) - [j5]Jian-Yu Shi, Hua Huang, Jia-Xin Li, Peng Lei, Yan-Ning Zhang, Kai Dong, Siu-Ming Yiu:
TMFUF: a triple matrix factorization-based unified framework for predicting comprehensive drug-drug interactions of new drugs. BMC Bioinform. 19-S(14): 27-37 (2018) - [j4]Hui Yu, Kui-Tao Mao, Jian-Yu Shi, Hua Huang, Zhi Chen, Kai Dong, Siu-Ming Yiu:
Predicting and understanding comprehensive drug-drug interactions via semi-nonnegative matrix factorization. BMC Syst. Biol. 12(1): 101-110 (2018) - 2017
- [j3]Jian-Yu Shi, Jia-Xin Li, Ke Gao, Peng Lei, Siu-Ming Yiu:
Predicting combinative drug pairs towards realistic screening via integrating heterogeneous features. BMC Bioinform. 18(S-12): 409:1-409:9 (2017) - [c12]Jianyu Shi, Hua Huang, Jia-Xin Li, Peng Lei, Yan-Ning Zhang, Siu-Ming Yiu:
Predicting Comprehensive Drug-Drug Interactions for New Drugs via Triple Matrix Factorization. IWBBIO (1) 2017: 108-117 - 2016
- [j2]Jianyu Shi, Jia-Xin Li, Hui-Meng Lu:
Predicting existing targets for new drugs base on strategies for missing interactions. BMC Bioinform. 17(S-8): 282 (2016) - [j1]Yong Zhang, Joseph Wun-Tat Chan, Francis Y. L. Chin, Hing-Fung Ting, Deshi Ye, Feng Zhang, Jianyu Shi:
Constrained pairwise and center-star sequences alignment problems. J. Comb. Optim. 32(1): 79-94 (2016) - [c11]Jianyu Shi, Ke Gao, Xue-Qun Shang, Siu-Ming Yiu:
LCM-DS: A novel approach of predicting drug-drug interactions for new drugs via Dempster-Shafer theory of evidence. BIBM 2016: 512-515 - [c10]Jian-Yu Shi:
The need of accelerators in analyzing biological networks. BIBM 2016: 1436 - 2015
- [c9]Jianyu Shi, Siu-Ming Yiu:
SRP: A concise non-parametric similarity-rank-based model for predicting drug-target interactions. BIBM 2015: 1636-1641 - [c8]Jianyu Shi, Jia-Xin Li, Hui-Meng Lu, Yong Zhang:
Predicting Drug-Target Interactions Between New Drugs and New Targets via Pairwise K-nearest Neighbor and Automatic Similarity Selection. IScIDE (2) 2015: 477-486 - 2014
- [c7]Jianyu Shi, Siu-Ming Yiu, Yiming Li, Henry C. M. Leung, Francis Y. L. Chin:
Predicting drug-target interaction for new drugs using enhanced similarity measures and super-target clustering1. BIBM 2014: 45-50 - [c6]Yong Zhang, Joseph Wun-Tat Chan, Francis Y. L. Chin, Hing-Fung Ting, Deshi Ye, Feng Zhang, Jianyu Shi:
On the Complexity of Constrained Sequences Alignment Problems. FAW 2014: 309-319 - 2010
- [c5]Sheryl Brahnam, Loris Nanni, Jian-Yu Shi, Alessandra Lumini:
Local Phase Quantization Texture Descriptor for Protein Classification. BIOCOMP 2010: 159-165
2000 – 2009
- 2009
- [c4]Jianyu Shi, Yan-Ning Zhang:
Fast SCOP Classification of Structural Class and Fold Using Secondary Structure Mining in Distance Matrix. PRIB 2009: 344-353 - 2008
- [c3]Yanning Zhang, Pei-Fang Zhai, Jianyu Shi, Jiangbin Zheng, Hong Zhou, Jiang-Bo Li:
A new system for computer-aided intraoperative simulation and postoperative facial appearance prediction of orthognathic surgery. MMSP 2008: 137-141 - 2007
- [c2]Jianyu Shi, Shao-Wu Zhang, Quan Pan, Yanning Zhang:
Using Decision Templates to Predict Subcellular Localization of Protein. PRIB 2007: 71-83 - 2006
- [c1]Jianyu Shi, Shao-Wu Zhang, Yan Liang, Quan Pan:
Prediction of Protein Subcellular Localizations Using Moment Descriptors and Support Vector Machine. PRIB 2006: 105-114
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 21:13 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
