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2020 – today
- 2023
[j21]Anatoly A. Sorokin, Denis S. Bormotov
, Denis S. Zavorotnyuk, Vasily A. Eliferov, Konstantin V. Bocharov, Stanislav I. Pekov, Evgeny N. Nikolaev, Igor A. Popov:
Aggregation of Multimodal ICE-MS Data into Joint Classifier Increases Quality of Brain Cancer Tissue Classification. Data 8(1): 8 (2023)- [j20]Denis S. Zavorotnyuk, Anatoly A. Sorokin, Stanislav I. Pekov, Denis S. Bormotov, Vasiliy A. Eliferov, Konstantin V. Bocharov, Eugene N. Nikolaev, Igor A. Popov:
Shapley Value as a Quality Control for Mass Spectra of Human Glioblastoma Tissues. Data 8(1): 21 (2023) - 2021
- [j19]Adrien Rougny, Vasundra Touré, John Albanese, Dagmar Waltemath, Denis Shirshov, Anatoly A. Sorokin, Gary D. Bader, Michael L. Blinov, Alexander Mazein:
SBGN Bricks Ontology as a tool to describe recurring concepts in molecular networks. Briefings Bioinform. 22(5) (2021) - [j18]Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Bormotov, Konstantin V. Bocharov, Denis S. Zavorotnyuk, Daniil G. Ivanov, Eugene N. Nikolaev, Igor A. Popov:
The software for interactive evaluation of mass spectra stability and reproducibility. Bioinform. 37(1): 140-142 (2021) - [j17]Denis S. Zavorotnyuk, Stanislav I. Pekov, Anatoly A. Sorokin, Denis S. Bormotov, Nikita Levin, Evgeny S. Zhvansky, Savva Semenov, Polina Strelnikova, Konstantin V. Bocharov, Alexander Vorobiev, Alexey S. Kononikhin, Vsevolod Shurkhay, Eugene N. Nikolaev, Igor A. Popov:
Lipid Profiles of Human Brain Tumors Obtained by High-Resolution Negative Mode Ambient Mass Spectrometry. Data 6(12): 132 (2021) - [i1]Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Zavorotnyuk, Vsevolod Shurkhay, Vasiliy A. Eliferov, Denis S. Bormotov, Daniil G. Ivanov, Alexander A. Potapov:
Comparison of different machine learning methods and dimensionality reduction for classification astrocytoma and glioblastoma tissues by mass spectra. F1000Research 10: 39 (2021) - 2020
- [j16]Mikhail A. Orlov, Anatoly A. Sorokin:
DNA sequence, physics, and promoter function: Analysis of high-throughput data On T7 promoter variants activity. J. Bioinform. Comput. Biol. 18(2): 2040001:1-2040001:15 (2020) - [c3]Igor Goryanin, Anatoly A. Sorokin, Olga Vasieva:
Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities. BIOINFORMATICS 2020: 253-259
2010 – 2019
- 2019
- [j15]Adrien Rougny, Vasundra Touré, Stuart L. Moodie, Irina Balaur, Tobias Czauderna, Hanna Borlinghaus, Ugur Dogrusoz, Alexander Mazein, Andreas Dräger, Michael L. Blinov, Alice Villéger, Robin Haw, Emek Demir, Huaiyu Mi, Anatoly A. Sorokin, Falk Schreiber, Augustin Luna:
Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. J. Integr. Bioinform. 16(2) (2019) - 2018
- [j14]Askarbek N. Orakov, Nazgul Sakenova, Anatoly A. Sorokin, Igor Goryanin:
ASAR: visual analysis of metagenomes in R. Bioinform. 34(8): 1404-1405 (2018) - [j13]Artem Ryasik, Mikhail A. Orlov, Evgenia Zykova, Timofei Ermak, Anatoly A. Sorokin:
Bacterial promoter prediction: Selection of dynamic and static physical properties of DNA for reliable sequence classification. J. Bioinform. Comput. Biol. 16(1): 1840003:1-1840003:16 (2018) - [c2]Askarbek N. Orakov, Nazgul Sakenova, Igor Goryanin, Anatoly A. Sorokin:
ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes. BIOINFORMATICS 2018: 196-200 - 2016
- [j12]Anna A. Deeva, Evgenia A. Temlyakova, Anatoly A. Sorokin, Elena V. Nemtseva, Valentina A. Kratasyuk:
Structural distinctions of fast and slow bacterial luciferases revealed by phylogenetic analysis. Bioinform. 32(20): 3053-3057 (2016) - 2015
- [j11]Huaiyu Mi, Falk Schreiber, Stuart L. Moodie, Tobias Czauderna, Emek Demir, Robin Haw, Augustin Luna, Nicolas Le Novère, Anatoly A. Sorokin, Alice Villéger:
Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2 . J. Integr. Bioinform. 12(2) (2015) - [j10]Anatoly A. Sorokin, Nicolas Le Novère, Augustin Luna, Tobias Czauderna, Emek Demir, Robin Haw, Huaiyu Mi, Stuart L. Moodie, Falk Schreiber, Alice Villéger:
Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2. J. Integr. Bioinform. 12(2) (2015) - 2014
- [c1]Anatoly A. Sorokin, Oksana Sorokina, J. Douglas Armstrong:
RKappa: Statistical Sampling Suite for Kappa Models. HSB 2014: 128-142 - 2013
- [j9]Richard R. Adams, Allan Clark, Azusa Yamaguchi, Neil Hanlon, Nikos Tsorman, Shakir Ali, Galina Lebedeva, Alexey N. Goltsov, Anatoly A. Sorokin, Ozgur E. Akman, Carl Troein, Andrew J. Millar, Igor Goryanin, Stephen Gilmore:
SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology. Bioinform. 29(5): 664-665 (2013) - [j8]Oksana Sorokina, Anatoly A. Sorokin, J. Douglas Armstrong, Vincent Danos:
A simulator for spatially extended kappa models. Bioinform. 29(23): 3105-3106 (2013) - 2012
- [j7]Martijn P. van Iersel, Alice Villéger, Tobias Czauderna, Sarah E. Boyd, Frank T. Bergmann, Augustin Luna, Emek Demir, Anatoly A. Sorokin, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber:
Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinform. 28(15): 2016-2021 (2012) - 2011
- [j6]Oksana Sorokina, Florence Corellou, David Dauvillée, Anatoly A. Sorokin, Igor Goryanin, Steven Ball, François-Yves Bouget, Andrew J. Millar:
Microarray data can predict diurnal changes of starch content in the picoalga Ostreococcus. BMC Syst. Biol. 5: 36 (2011)
2000 – 2009
- 2009
- [j5]Gavin H. Thomas, Jeremy Zucker, Sandy J. Macdonald, Anatoly A. Sorokin, Igor Goryanin, Angela E. Douglas:
A fragile metabolic network adapted for cooperation in the symbiotic bacterium Buchnera aphidicola. BMC Syst. Biol. 3: 24 (2009) - 2006
- [j4]Anatoly A. Sorokin, Kirill Paliy, Alexey Selkov, Oleg V. Demin, Serge Dronov, Peter Ghazal, Igor Goryanin:
The Pathway Editor: A tool for managing complex biological networks. IBM J. Res. Dev. 50(6): 561-574 (2006) - [j3]Anatoly A. Sorokin, Alexander A. Osypov, Timur R. Dzhelyadin, Petr M. Beskaravainy, Svetlana G. Kamzolova:
Electrostatic Properties of Promoter Recognized by e. Coli Rna Polymerase Esigma70. J. Bioinform. Comput. Biol. 4(2): 455-468 (2006) - [j2]Stuart L. Moodie, Anatoly A. Sorokin, Igor Goryanin, Peter Ghazal:
A Graphical Notation to describe the Logical Interactions of Biological Pathways. J. Integr. Bioinform. 3(2) (2006)
1990 – 1999
- 1999
- [j1]Vladimir Sobolev, Anatoly A. Sorokin, Jaime Prilusky, Enrique E. Abola, Marvin Edelman:
Automated analysis of interatomic contacts in proteins. Bioinform. 15(4): 327-332 (1999)
Coauthor Index
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