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2020 – today
- 2023
[j8]Teresa De Jesus Martinez
, Elliot A. Hershberg, Emma Guo, Garrett Stevens, Colin M. Diesh, Peter Xie, Caroline Bridge, Scott Cain, Robin Haw, Robert M. Buels, Lincoln D. Stein, Ian H. Holmes:
JBrowse Jupyter: a Python interface to JBrowse 2. Bioinform. 39(1) (2023)- 2021
- [j7]Elliot A. Hershberg, Garrett Stevens, Colin M. Diesh, Peter Xie, Teresa De Jesus Martinez, Robert M. Buels, Lincoln Stein, Ian H. Holmes:
JBrowseR: an R interface to the JBrowse 2 genome browser. Bioinform. 37(21): 3914-3915 (2021) - 2020
- [j6]Md. Shamimuzzaman, Justin J. Le Tourneau, Deepak R. Unni, Colin M. Diesh, Deborah A. Triant, Amy T. Walsh, Aditi Tayal, Gavin C. Conant, Darren E. Hagen, Christine G. Elsik:
Bovine Genome Database: new annotation tools for a new reference genome. Nucleic Acids Res. 48(Database-Issue): D676-D681 (2020)
2010 – 2019
- 2019
- [j5]Robert M. Buels, Shihab Dider, Colin M. Diesh, James Robinson, Ian H. Holmes:
Cram-JS: reference-based decompression in node and the browser. Bioinform. 35(21): 4451-4452 (2019) - [j4]Nathan A. Dunn, Deepak R. Unni, Colin M. Diesh, Monica C. Munoz-Torres, Nomi L. Harris, Eric Yao, Helena Rasche, Ian H. Holmes, Christine G. Elsik, Suzanna E. Lewis:
Apollo: Democratizing genome annotation. PLoS Comput. Biol. 15(2) (2019) - 2017
- [j3]Tim E. Putman, Sebastien Lelong, Sebastian Burgstaller-Muehlbacher, Andra Waagmeester, Colin M. Diesh, Nathan A. Dunn, Monica C. Munoz-Torres, Gregory S. Stupp, Chunlei Wu, Andrew I. Su, Benjamin M. Good:
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata. Database J. Biol. Databases Curation 2017: bax025 (2017) - 2016
- [j2]Christine G. Elsik, Aditi Tayal, Colin M. Diesh, Deepak R. Unni, Marianne L. Emery, Hung N. Nguyen, Darren E. Hagen:
Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine. Nucleic Acids Res. 44(Database-Issue): 793-800 (2016) - [j1]Christine G. Elsik, Deepak R. Unni, Colin M. Diesh, Aditi Tayal, Marianne L. Emery, Hung N. Nguyen, Darren E. Hagen:
Bovine Genome Database: new tools for gleaning function from the Bos taurus genome. Nucleic Acids Res. 44(Database-Issue): 834-839 (2016)
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