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2020 – today
- 2022
[j17]Laura Fancello, Alessandro Guida
, Gianmaria Frige, Arnaud Céol, Gabriele Babini, Giovanni Luca Scaglione, Mario Zanfardino, Tommaso Mazza, Lorenzo Ferrando, Pier Giuseppe Pelicci, Luca Mazzarella:
TMBleR: a bioinformatic tool to optimize TMB estimation and predictive power. Bioinform. 38(6): 1724-1726 (2022)- 2020
- [j16]Arnaud Céol, Piero Montanari, Ilaria Bartolini, Stefano Ceri, Paolo Ciaccia, Marco Patella, Marco Masseroli:
Search and comparison of (epi)genomic feature patterns in multiple genome browser tracks. BMC Bioinform. 21(1): 464 (2020)
2010 – 2019
- 2019
- [j15]Paolo Romano, Arnaud Céol, Andreas Dräger, Antonino Fiannaca, Rosalba Giugno, Massimo La Rosa, Luciano Milanesi, Ulrich Pfeffer, Riccardo Rizzo, Soo-Yong Shin, Junfeng Xia, Alfonso Urso:
The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes. BMC Bioinform. 20-S(4): 125:1-125:9 (2019) - 2018
- [j14]M. Sivade Dumousseau, Diego Alonso-López, Mais G. Ammari, Glyn Bradley, Nancy H. Campbell, Arnaud Céol, Gianni Cesareni, Colin W. Combe, Javier De Las Rivas, Noemi del-Toro, Joshua Heimbach, Henning Hermjakob, Igor Jurisica, Maximilian Koch, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit H. M. Meldal, Gos Micklem, Simona Panni, Pablo Porras, Sylvie Ricard-Blum, Bernd Roechert, Lukasz Salwínski, Anjali Shrivastava, Julie M. Sullivan, Nicolas Thierry-Mieg, Yo Yehudi, Kim Van Roey, Sandra E. Orchard:
Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. BMC Bioinform. 19(1): 134:1-134:8 (2018) - 2016
- [j13]Arnaud Céol, Lisette G. G. C. Verhoef, Mark Wade, Heiko Müller:
Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks. BMC Bioinform. 17(S-4): 54 (2016) - [j12]Giorgio E. M. Melloni, Stefano de Pretis, Laura Riva, Mattia Pelizzola, Arnaud Céol, Jole Costanza, Heiko Müller, Luca Zammataro:
LowMACA: exploiting protein family analysis for the identification of rare driver mutations in cancer. BMC Bioinform. 17: 80 (2016) - 2015
- [j11]Arnaud Céol, Heiko Müller:
The MI bundle: enabling network and structural biology in genome visualization tools. Bioinform. 31(22): 3679-3681 (2015) - 2014
- [j10]Luca Zammataro, Rita DeMolfetta, Gabriele Bucci, Arnaud Céol, Heiko Müller:
AnnotateGenomicRegions: a web application. BMC Bioinform. 15(S-1): S8 (2014) - [j9]Francesco Venco, Yuriy Vaskin, Arnaud Céol, Heiko Müller:
SMITH: a LIMS for handling next-generation sequencing workflows. BMC Bioinform. 15(S-14): S3 (2014) - [j8]Roberto Mosca, Arnaud Céol, Amelie Stein, Roger Olivella, Patrick Aloy:
3did: a catalog of domain-based interactions of known three-dimensional structure. Nucleic Acids Res. 42(Database-Issue): 374-379 (2014) - 2012
- [j7]Roland A. Pache, Arnaud Céol, Patrick Aloy:
NetAligner - a network alignment server to compare complexes, pathways and whole interactomes. Nucleic Acids Res. 40(Web-Server-Issue): 157-161 (2012) - 2011
- [j6]Amelie Stein, Arnaud Céol, Patrick Aloy:
3did: identification and classification of domain-based interactions of known three-dimensional structure. Nucleic Acids Res. 39(Database-Issue): 718-723 (2011) - 2010
- [j5]Arnaud Céol, Andrew Chatr-aryamontri, Luana Licata, Daniele Peluso, Leonardo Briganti, Livia Perfetto, Luisa Castagnoli, Gianni Cesareni:
MINT, the molecular interaction database: 2009 update. Nucleic Acids Res. 38(Database-Issue): 532-539 (2010)
2000 – 2009
- 2009
- [j4]Andrew Chatr-aryamontri, Arnaud Céol, Daniele Peluso, Aurelio Nardozza, Simona Panni, Francesca Sacco, Michele Tinti, Alex Smolyar, Luisa Castagnoli, Marc Vidal, Michael E. Cusick, Gianni Cesareni:
VirusMINT: a viral protein interaction database. Nucleic Acids Res. 37(Database-Issue): 669-673 (2009) - 2007
- [j3]Arnaud Céol, Andrew Chatr-aryamontri, Elena Santonico, Roberto Sacco, Luisa Castagnoli, Gianni Cesareni:
DOMINO: a database of domain-peptide interactions. Nucleic Acids Res. 35(Database-Issue): 557-560 (2007) - [j2]Andrew Chatr-aryamontri, Arnaud Céol, Luisa Montecchi-Palazzi, Giuliano Nardelli, Maria Victoria Schneider, Luisa Castagnoli, Gianni Cesareni:
MINT: the Molecular INTeraction database. Nucleic Acids Res. 35(Database-Issue): 572-574 (2007) - 2005
- [j1]Maria Persico, Arnaud Céol, Caius Gavrila, Robert Hoffmann, Arnaldo Florio, Gianni Cesareni:
HomoMINT: an inferred human network based on orthology mapping of protein interactions discovered in model organisms. BMC Bioinform. 6(S-4) (2005)
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