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2020 – today
- 2020
[b1]Damien Eveillard:
From Systems Biology to Systems Ecology: A Computational Journey Through Biological Scales. (De la biologie systémique à l'écologie systémique : un voyage informatique à travers les échelles biologiques). University of Nantes, France, 2020
2010 – 2019
- 2017
- [j7]Sylvain Prigent
, Clémence Frioux, Simon M. Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Fabien Gutknecht, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel:
Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks. PLoS Comput. Biol. 13(1) (2017) - 2016
- [j6]Vicente Acuña, Andrés Aravena, Carito Guziolowski, Damien Eveillard, Anne Siegel, Alejandro Maass:
Deciphering transcriptional regulations coordinating the response to environmental changes. BMC Bioinform. 17: 35 (2016) - 2015
- [c8]Marko Budinich, Jérémie Bourdon, Abdelhalim Larhlimi, Damien Eveillard:
OPINION PAPER Evolutionary Constraint-Based Formulation Requires New Bi-level Solving Techniques. CMSB 2015: 279-281 - 2013
- [c7]Philippe Bordron, Damien Eveillard, Alejandro Maass, Anne Siegel, Sven Thiele:
An ASP Application in Integrative Biology: Identification of Functional Gene Units. LPNMR 2013: 206-218 - [c6]Guillaume Collet, Damien Eveillard, Martin Gebser, Sylvain Prigent, Torsten Schaub, Anne Siegel, Sven Thiele:
Extending the Metabolic Network of Ectocarpus Siliculosus Using Answer Set Programming. LPNMR 2013: 245-256 - 2011
- [j5]Jérémie Bourdon, Damien Eveillard, Anne Siegel:
Integrating Quantitative Knowledge into a Qualitative Gene Regulatory Network. PLoS Comput. Biol. 7(9) (2011) - [c5]Philippe Bordron, Damien Eveillard, Irena Rusu:
SIPPER: A flexible method to integrate heterogeneous data into a metabolic network. ICCABS 2011: 40-45 - 2010
- [j4]Jonathan Fromentin, Damien Eveillard, Olivier F. Roux:
Hybrid modeling of biological networks: mixing temporal and qualitative biological properties. BMC Syst. Biol. 4: 79 (2010) - [c4]Alexandre Goldsztejn, Olivier Mullier, Damien Eveillard, Hiroshi Hosobe:
Including Ordinary Differential Equations Based Constraints in the Standard CP Framework. CP 2010: 221-235
2000 – 2009
- 2009
- [j3]Géraldine Del Mondo, Damien Eveillard, Irena Rusu:
Homogeneous decomposition of protein interaction networks: refining the description of intra-modular interactions. Bioinform. 25(7): 926-932 (2009) - [j2]Jamil Ahmad, Jérémie Bourdon, Damien Eveillard, Jonathan Fromentin, Olivier F. Roux, Christine Sinoquet:
Temporal constraints of a gene regulatory network: Refining a qualitative simulation. Biosyst. 98(3): 149-159 (2009) - [c3]Sébastien Angibaud, Damien Eveillard, Guillaume Fertin, Irena Rusu:
Comparing Bacterial Genomes by Searching Their Common Intervals. BICoB 2009: 102-113 - 2004
- [j1]Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr:
A multi-scale constraint programming model of alternative splicing regulation. Theor. Comput. Sci. 325(1): 3-24 (2004) - [c2]Alexander Bockmayr, Arnaud Courtois, Damien Eveillard, M. Vezain:
Building and Analysing an Integrative Model of HIV-1 RNA Alternative Splicing. CMSB 2004: 43-57 - 2003
- [c1]Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr:
Multiscale Modeling of Alternative Splicing Regulation. CMSB 2003: 75-87
Coauthor Index
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