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2020 – today
- 2024
[c24]Siiri Paananen
, Karin Johansson, Lars Ailo Bongo, Clara Sayffaerth, Eleftherios Papachristos, Mari Suoheimo, Mikael Wiberg, Jonna Häkkilä:
Interactive Storytelling for Communities, Heritage and Public Engagement. NordiCHI (Adjunct) 2024: 36:1-36:3- [i23]Nikita Shvetsov, Anders Sildnes, Lill-Tove Rasmussen Busund, Stig Dalen, Kajsa Møllersen, Lars Ailo Bongo, Thomas K. Kilvaer:
Fast TILs estimation in lung cancer WSIs based on semi-stochastic patch sampling. CoRR abs/2405.02913 (2024) - [i22]Bjørn-Richard Pedersen, Maisha Islam, Doris Tove Kristoffersen, Lars Ailo Bongo, Eilidh Garrett, Alice Reid, Hilde L. Sommerseth:
Coding historical causes of death data with Large Language Models. CoRR abs/2405.07560 (2024) - [i21]Masoud Tafavvoghi, Anders Sildnes, Mehrdad Rakaee, Nikita Shvetsov, Lars Ailo Bongo, Lill-Tove Rasmussen Busund, Kajsa Møllersen:
Deep learning-based classification of breast cancer molecular subtypes from H&E whole-slide images. CoRR abs/2409.09053 (2024) - 2023
- [i20]Masoud Tafavvoghi, Lars Ailo Bongo, Nikita Shvetsov, Lill-Tove Rasmussen Busund, Kajsa Møllersen:
Publicly available datasets of breast histopathology H&E whole-slide images: A systematic review. CoRR abs/2306.01546 (2023) - [i19]Bjørn-Richard Pedersen, Rigmor Katrine Johansen, Einar J. Holsbø, Hilde L. Sommerseth, Lars Ailo Bongo:
More efficient manual review of automatically transcribed tabular data. CoRR abs/2306.16126 (2023) - [i18]Pavitra Chauhan, Mohsen Gamal Saad Askar, Bjørn Fjukstad, Lars Ailo Bongo, Edvard Pedersen:
Interoperable synthetic health data with SyntHIR to enable the development of CDSS tools. CoRR abs/2308.02613 (2023) - 2022
- [c23]Bjørn-Jostein Singstad, Antony M. Gitau, Markus Kreutzer Johnsen, Johan Ravn, Lars Ailo Bongo, Henrik Schirmer:
Phonocardiogram Classification Using 1-Dimensional Inception Time Convolutional Neural Networks. CinC 2022: 1-4 - [i17]Nikita Shvetsov, Morten Grønnesby, Edvard Pedersen, Kajsa Møllersen, Lill-Tove Rasmussen Busund, Ruth Schwienbacher, Lars Ailo Bongo, Thomas K. Kilvaer:
A Pragmatic Machine Learning Approach to Quantify Tumor Infiltrating Lymphocytes in Whole Slide Images. CoRR abs/2202.06590 (2022) - [i16]Dina Benedicte Stensen, Rafael Adolfo Nozal Cañadas, Lars Småbrekke, Karina Standahl Olsen, Christopher Sivert Nielsen, Kristian Svendsen, Anne Merethe Hanssen, Johanna Sollid, Gunnar Skov Simonsen, Lars Ailo Bongo, Anne-Sofie Furberg:
Social network analysis of Staphylococcus aureus carriage in a general youth population. CoRR abs/2202.08794 (2022) - 2021
- [i15]Bjørn-Richard Pedersen, Einar J. Holsbø, Trygve Andersen, Nikita Shvetsov, Johan Ravn, Hilde Leikny Sommerseth, Lars Ailo Bongo:
Occode: an end-to-end machine learning pipeline for transcription of historical population censuses. CoRR abs/2106.03996 (2021) - [i14]Álvaro Martínez Fernández, Lars Ailo Bongo, Edvard Pedersen:
GeneNet VR: Interactive visualization of large-scale biological networks using a standalone headset. CoRR abs/2109.02937 (2021) - 2020
- [i13]Tengel Ekrem Skar, Einar J. Holsbø, Kristian Svendsen, Lars Ailo Bongo:
Interactive exploration of population scale pharmacoepidemiology datasets. CoRR abs/2005.09890 (2020)
2010 – 2019
- 2019
- [j9]Cristina Jácome, Johan Ravn, Einar J. Holsbø, Juan Carlos Aviles Solis, Hasse Melbye, Lars Ailo Bongo:
Convolutional Neural Network for Breathing Phase Detection in Lung Sounds. Sensors 19(8): 1798 (2019) - [c22]Bjørn Fjukstad, Nina Angelvik, Morten Grønnesby, Maria Wulff Hauglann, Hedinn Gunhildrud, Fredrik Høisæther Rasch, Julianne Iversen, Margaret Dalseng, Lars Ailo Bongo:
Teaching Electronics and Programming in Norwegian Schools Using the air: bit Sensor Kit. ITiCSE 2019: 374-380 - [c21]Bjørn Fjukstad, Vanessa Dumeaux, Michael T. Hallett, Lars Ailo Bongo:
Reproducible Data Analysis Pipelines for Precision Medicine. PDP 2019: 299-306 - [i12]Bjørn Fjukstad, Nina Angelvik, Morten Grønnesby, Maria Wulff Hauglann, Hedinn Gunhildrud, Fredrik Høisæther Rasch, Julianne Iversen, Margaret Dalseng, Lars Ailo Bongo:
Teaching Electronics and Programming in Norwegian Schools Using the air: bit Sensor Kit. CoRR abs/1901.05240 (2019) - [i11]Cristina Jácome, Johan Ravn, Einar J. Holsbø, Juan Carlos Aviles Solis, Hasse Melbye, Lars Ailo Bongo:
Convolutional neural network for breathing phase detection in lung sounds. CoRR abs/1903.10251 (2019) - 2018
- [c20]Bjørn Fjukstad, Nina Angelvik, Maria Wulff Hauglann, Joachim Sveia Knutsen, Morten Grønnesby, Hedinn Gunhildrud, Lars Ailo Bongo:
Low-Cost Programmable Air Quality Sensor Kits in Science Education. SIGCSE 2018: 227-232 - [i10]Mike Voets, Kajsa Møllersen, Lars Ailo Bongo:
Replication study: Development and validation of deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs. CoRR abs/1803.04337 (2018) - [i9]Inge Alexander Raknes, Lars Ailo Bongo:
META-pipe Authorization service. F1000Research 7: 32 (2018) - [i8]Kidane M. Tekle, Sveinung Gundersen, Kjetil Klepper, Lars Ailo Bongo, Inge Alexander Raknes, Xiaxi Li, Wei Zhang, Christian Andreetta, Teshome Dagne Mulugeta, Matús Kalas, Morten B. Rye, Erik Hjerde, Jeevan Karloss Antony Samy, Ghislain Fornous, Abdulrahman Azab, Dag Inge Våge, Eivind Hovig, Nils Peder Willassen, Finn Drabløs, Ståle Nygård, Kjell Petersen, Inge Jonassen:
Norwegian e-Infrastructure for Life Sciences (NeLS). F1000Research 7: 968 (2018) - 2017
- [j8]Bjørn Fjukstad, Lars Ailo Bongo:
A Review of Scalable Bioinformatics Pipelines. Data Sci. Eng. 2(3): 245-251 (2017) - [j7]Edvard Pedersen, Lars Ailo Bongo:
Large-scale biological meta-database management. Future Gener. Comput. Syst. 67: 481-489 (2017) - [j6]Vanessa Dumeaux, Bjørn Fjukstad, Hans E. Fjosne, Jan-Ole Frantzen, Marit Muri Holmen, Enno Rodegerdts, Ellen Schlichting, Anne-Lise Børresen-Dale, Lars Ailo Bongo, Eiliv Lund, Michael T. Hallett:
Interactions between the tumor and the blood systemic response of breast cancer patients. PLoS Comput. Biol. 13(9) (2017) - [c19]Bjørn Fjukstad, Vanessa Dumeaux, Karina Standahl Olsen, Eiliv Lund, Michael T. Hallett, Lars Ailo Bongo:
Building Applications for Interactive Data Exploration in Systems Biology. BCB 2017: 556-561 - [c18]Inge Alexander Raknes, Bjørn Fjukstad, Lars Ailo Bongo:
nsroot: Minimalist process isolation tool implemented with Linux namespaces. NIK 2017 - [i7]Morten Grønnesby, Juan Carlos Aviles Solis, Einar J. Holsbø, Hasse Melbye, Lars Ailo Bongo:
Machine Learning Based Crackle Detection in Lung Sounds. CoRR abs/1706.00005 (2017) - [i6]Espen Mikal Robertsen, Hubert Denise, Alex L. Mitchell, Robert D. Finn, Lars Ailo Bongo, Nils Peder Willassen:
ELIXIR pilot action: Marine metagenomics - towards a domain specific set of sustainable services. F1000Research 6: 70- (2017) - [i5]Aleksandr Agafonov, Kimmo Mattila, Cuong Duong Tuan, Lars Tiede, Inge Alexander Raknes, Lars Ailo Bongo:
META-pipe cloud setup and execution. F1000Research 6: 2060- (2017) - 2016
- [p1]Edvard Pedersen, Lars Ailo Bongo:
Big Biological Data Management. Resource Management for Big Data Platforms 2016: 265-277 - [i4]Espen Mikal Robertsen, Tim Kahlke, Inge Alexander Raknes, Edvard Pedersen, Erik Kjærner-Semb, Martin Ernstsen, Lars Ailo Bongo, Nils Peder Willassen:
META-pipe - Pipeline Annotation, Analysis and Visualization of Marine Metagenomic Sequence Data. CoRR abs/1604.04103 (2016) - [i3]Inge Alexander Raknes, Bjørn Fjukstad, Lars Ailo Bongo:
nsroot: Minimalist Process Isolation Tool Implemented With Linux Namespaces. CoRR abs/1609.03750 (2016) - 2015
- [j5]Milan Mihajlovic, Lars Ailo Bongo, Raimondas Ciegis, Neki Frasheri, Dragi Kimovski, Peter G. Kropf, Svetozar Margenov, Maya G. Neytcheva, Thomas Rauber, Gudula Rünger, Roman Trobec, Roel Wuyts, Roman Wyrzykowski, Jing Gong:
Applications for ultrascale computing. Supercomput. Front. Innov. 2(1): 19-48 (2015) - [c17]Ove Kåven, Lars Ailo Bongo:
MORTAL - Multiparadigm Optimizing Retargetable Transdisciplinary Abstraction Language. NIK 2015 - [c16]Edvard Pedersen, Inge Alexander Raknes, Martin Ernstsen, Lars Ailo Bongo:
Integrating Data-Intensive Computing Systems with Biological Data Analysis Frameworks. PDP 2015: 733-740 - [i2]Edvard Pedersen, Lars Ailo Bongo:
Large-scale Biological Meta-Database Management. CoRR abs/1503.07759 (2015) - [i1]Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo:
Kvik: three-tier data exploration tools for flexible analysis of genomic data in epidemiological studies. F1000Research 4: 81 (2015) - 2014
- [c15]Lars Ailo Bongo, Edvard Pedersen, Martin Ernstsen:
Data-Intensive Computing Infrastructure Systems for Unmodified Biological Data Analysis Pipelines. CIBB 2014: 259-272 - [c14]Martin Ernstsen, Erik Kjærner-Semb, Nils Peder Willassen, Lars Ailo Bongo:
Mario: Interactive Tuning of Biological Analysis Pipelines Using Iterative Processing. Euro-Par Workshops (1) 2014: 263-274 - [c13]Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo:
Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank. NIK 2014 - [c12]Giacomo Tartari, Lars Tiede, Einar J. Holsbø, Kenneth Knudsen, Inge Alexander Raknes, Bjørn Fjukstad, Nicolle Mode, John Markus Bjørndalen, Eiliv Lund, Lars Ailo Bongo:
Mr. Clean: A Tool for Tracking and Comparing the Lineage of Scientific Visualization Code. VISSOFT 2014: 75-78 - 2013
- [j4]Christopher Y. Park, Aaron K. Wong, Casey S. Greene, Jessica Rowland, Yuanfang Guan, Lars Ailo Bongo, Rebecca D. Burdine, Olga G. Troyanskaya:
Functional Knowledge Transfer for High-accuracy Prediction of Under-studied Biological Processes. PLoS Comput. Biol. 9(3) (2013) - [c11]Edvard Pedersen, Nils Peder Willassen, Lars Ailo Bongo:
Transparent Incremental Updates for Genomics Data Analysis Pipelines. Euro-Par Workshops 2013: 311-320 - [c10]Lars Ailo Bongo:
Bulk synchronous visualization. PMAM 2013: 21-30 - 2012
- [j3]Aaron K. Wong, Christopher Y. Park, Casey S. Greene, Lars Ailo Bongo, Yuanfang Guan, Olga G. Troyanskaya:
IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks. Nucleic Acids Res. 40(Web-Server-Issue): 484-490 (2012) - 2010
- [j2]William K. Josephson, Lars Ailo Bongo, Kai Li, David Flynn:
DFS: A file system for virtualized flash storage. ACM Trans. Storage 6(3): 14:1-14:25 (2010) - [j1]William K. Josephson, Lars Ailo Bongo, David Flynn, Kai Li:
DFS: A File System for Virtualized Flash Storage. login Usenix Mag. 35(2) (2010) - [c9]William K. Josephson, Lars Ailo Bongo, David Flynn, Kai Li:
DFS: A File System for Virtualized Flash Storage. FAST 2010: 85-100
2000 – 2009
- 2006
- [c8]Lars Ailo Bongo, Grant Wallace, Tore Larsen, Kai Li, Olga G. Troyanskaya:
Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks. GCCB 2006: 157-174 - [c7]Lars Ailo Bongo, Brian Vinter, Otto J. Anshus, Tore Larsen, John Markus Bjørndalen:
Using Overdecomposition to Overlap Communication Latencies with Computation and Take Advantage of SMT Processors. ICPP Workshops 2006: 239-247 - 2005
- [c6]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen:
Low Overhead High Performance Runtime Monitoring of Collective Communication. ICPP 2005: 455-464 - 2004
- [c5]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen:
Collective Communication Performance Analysis Within the Communication System. Euro-Par 2004: 163-172 - [c4]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen, Tore Larsen:
Extending Collective Operations with Application Semantics for Improving Multi-Cluster Performance. ISPDC/HeteroPar 2004: 320-327 - 2003
- [c3]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen:
EventSpace - Exposing and Observing Communication Behavior of Parallel Cluster Applications. Euro-Par 2003: 47-56 - [c2]Otto J. Anshus, John Markus Bjørndalen, Lars Ailo Bongo:
Experiences Parallelizing, Configuring, Monitoring and Visualizing Applications for Clusters and Multi-Clusters. PARCO 2003: 879-886 - 2002
- [c1]John Markus Bjørndalen, Otto J. Anshus, Tore Larsen, Lars Ailo Bongo, Brian Vinter:
Scalable Processing and Communication Performance in a Multi-Media Related Context. EUROMICRO 2002: 200-206
Coauthor Index
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