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2020 – today
- 2023
[j59]Kathleen Gallo, Emanuel Kemmler
, Andrean Goede, Finnja Becker, Mathias Dunkel, Robert Preissner, Priyanka Banerjee:
SuperNatural 3.0 - a database of natural products and natural product-based derivatives. Nucleic Acids Res. 51(D1): 654-659 (2023)- 2022
- [j58]Kathleen Gallo, Andrean Goede, Robert Preissner, Björn-Oliver Gohlke:
SuperPred 3.0: drug classification and target prediction - a machine learning approach. Nucleic Acids Res. 50(W1): 726-731 (2022) - 2021
- [j57]Ochuko L. Erukainure, Olubunmi Atolani, Aliyu Muhammad, Rahul Ravichandran, Musa M. Abarshi, Sanusi B. Katsayal, Chika I. Chukwuma, Robert Preissner, Priyanka Banerjee, M. Ahmed Mesaik:
Translational suppression of SARS-COV-2 ORF8 protein mRNA as a Viable therapeutic target against COVID-19: Computational studies on potential roles of isolated compounds from Clerodendrum volubile leaves. Comput. Biol. Medicine 139: 104964 (2021) - [j56]Kathleen Gallo, Andrean Goede, Andreas Eckert, Barbara Moahamed, Robert Preissner, Björn-Oliver Gohlke:
PROMISCUOUS 2.0: a resource for drug-repositioning. Nucleic Acids Res. 49(Database-Issue): D1373-D1380 (2021) - [j55]Franziska Fritz, Robert Preissner, Priyanka Banerjee:
VirtualTaste: a web server for the prediction of organoleptic properties of chemical compounds. Nucleic Acids Res. 49(Webserver-Issue): 679-684 (2021) - [j54]René Staritzbichler, Nikola Ristic, Andrean Goede, Robert Preissner, Peter Werner Hildebrand:
Voronoia 4-ever. Nucleic Acids Res. 49(Webserver-Issue): 685- (2021) - 2020
- [j53]Priyanka Banerjee, Mathias Dunkel, Emanuel Kemmler, Robert Preissner:
SuperCYPsPred - a web server for the prediction of cytochrome activity. Nucleic Acids Res. 48(Webserver-Issue): W580-W585 (2020)
2010 – 2019
- 2018
- [j52]Vishal B. Siramshetty, Qiaofeng Chen, Prashanth Devarakonda, Robert Preissner:
The Catch-22 of Predicting hERG Blockade Using Publicly Accessible Bioactivity Data. J. Chem. Inf. Model. 58(6): 1224-1233 (2018) - [j51]Vishal B. Siramshetty, Robert Preissner, Björn-Oliver Gohlke:
Exploring Activity Profiles of PAINS and Their Structural Context in Target-Ligand Complexes. J. Chem. Inf. Model. 58(9): 1847-1857 (2018) - [j50]Vishal B. Siramshetty, Andreas Eckert, Björn-Oliver Gohlke, Andrean Goede, Qiaofeng Chen, Prashanth Devarakonda, Saskia Preissner, Robert Preissner:
SuperDRUG2: a one stop resource for approved/marketed drugs. Nucleic Acids Res. 46(Database-Issue): D1137-D1143 (2018) - [j49]Marie Chantal Lemfack, Björn-Oliver Gohlke, Serge M. T. Toguem, Saskia Preissner, Birgit Piechulla, Robert Preissner:
mVOC 2.0: a database of microbial volatiles. Nucleic Acids Res. 46(Database-Issue): D1261-D1265 (2018) - [j48]Priyanka Banerjee, Andreas Eckert, Anna K. Schrey, Robert Preissner:
ProTox-II: a webserver for the prediction of toxicity of chemicals. Nucleic Acids Res. 46(Webserver-Issue): W257-W263 (2018) - 2016
- [j47]Priyanka Banerjee, Vishal B. Siramshetty, Malgorzata N. Drwal, Robert Preissner:
Computational methods for prediction of in vitro effects of new chemical structures. J. Cheminformatics 8(1): 51:1-51:11 (2016) - [j46]Björn-Oliver Gohlke, Janette Nickel, Raik Otto, Mathias Dunkel, Robert Preissner:
CancerResource - updated database of cancer-relevant proteins, mutations and interacting drugs. Nucleic Acids Res. 44(Database-Issue): 932-937 (2016) - [j45]Vishal B. Siramshetty, Janette Nickel, Christian Omieczynski, Björn-Oliver Gohlke, Malgorzata N. Drwal, Robert Preissner:
WITHDRAWN - a resource for withdrawn and discontinued drugs. Nucleic Acids Res. 44(Database-Issue): 1080-1086 (2016) - [j44]Jochen Ismer, Alexander S. Rose, Johanna K. S. Tiemann, Andrean Goede, Robert Preissner, Peter W. Hildebrand:
SL2: an interactive webtool for modeling of missing segments in proteins. Nucleic Acids Res. 44(Webserver-Issue): W390-W394 (2016) - 2015
- [j43]Björn-Oliver Gohlke, Tim Overkamp, Anja Richter, Antje Richter, Peter T. Daniel, Bernd Gillissen, Robert Preissner:
2D and 3D similarity landscape analysis identifies PARP as a novel off-target for the drug Vatalanib. BMC Bioinform. 16: 308:1-308:9 (2015) - [j42]Priyanka Banerjee, Jevgeni Erehman, Björn-Oliver Gohlke, Thomas Wilhelm, Robert Preissner, Mathias Dunkel:
Super Natural II - a database of natural products. Nucleic Acids Res. 43(Database-Issue): 935-939 (2015) - 2014
- [j41]Marie Chantal Lemfack, Janette Nickel, Mathias Dunkel, Robert Preissner, Birgit Piechulla:
mVOC: a database of microbial volatiles. Nucleic Acids Res. 42(Database-Issue): 744-748 (2014) - [j40]Björn O. Gohlke, Robert Preissner, Saskia Preissner:
SuperPain - a resource on pain-relieving compounds targeting ion channels. Nucleic Acids Res. 42(Database-Issue): 1107-1112 (2014) - [j39]Michael F. Hoffmann, Sarah C. Preissner, Janette Nickel, Mathias Dunkel, Robert Preissner, Saskia Preissner:
The Transformer database: biotransformation of xenobiotics. Nucleic Acids Res. 42(Database-Issue): 1113-1117 (2014) - [j38]Janette Nickel, Björn-Oliver Gohlke, Jevgeni Erehman, Priyanka Banerjee, Wen Wei Rong, Andrean Goede, Mathias Dunkel, Robert Preissner:
SuperPred: update on drug classification and target prediction. Nucleic Acids Res. 42(Webserver-Issue): 26-31 (2014) - [j37]Malgorzata N. Drwal, Priyanka Banerjee, Mathias Dunkel, Martin R. Wettig, Robert Preissner:
ProTox: a web server for the in silico prediction of rodent oral toxicity. Nucleic Acids Res. 42(Webserver-Issue): 53-58 (2014) - 2013
- [j36]Joachim von Eichborn, Anna Lena Woelke, Filippo Castiglione, Robert Preissner:
VaccImm: simulating peptide vaccination in cancer therapy. BMC Bioinform. 14: 127 (2013) - [j35]Joachim von Eichborn, Mathias Dunkel, Björn O. Gohlke, Sarah C. Preissner, Michael F. Hoffmann, Jakob M. J. Bauer, J. Douglas Armstrong, Martin H. Schaefer, Miguel A. Andrade-Navarro, Nicolas Le Novère, Michael D. R. Croning, Seth G. N. Grant, Pim van Nierop, August B. Smit, Robert Preissner:
SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations. Nucleic Acids Res. 41(Database-Issue): 834-840 (2013) - 2012
- [j34]Nikolai Hecker, Jessica Ahmed, Joachim von Eichborn, Mathias Dunkel, Karel Macha, Andreas Eckert, Michael K. Gilson, Philip E. Bourne, Robert Preissner:
SuperTarget goes quantitative: update on drug-target interactions. Nucleic Acids Res. 40(Database-Issue): 1113-1117 (2012) - 2011
- [j33]Joachim von Eichborn, Philip E. Bourne, Robert Preissner:
Cobweb: a Java applet for network exploration and visualisation. Bioinform. 27(12): 1725-1726 (2011) - [j32]Jessica Ahmed, Saskia Preissner, Mathias Dunkel, Catherine L. Worth, Andreas Eckert, Robert Preissner:
SuperSweet - a resource on natural and artificial sweetening agents. Nucleic Acids Res. 39(Database-Issue): 377-382 (2011) - [j31]Jessica Ahmed, Thomas Meinel, Mathias Dunkel, Manuela S. Murgueitio, Robert Adams, Corinna Blasse, Andreas Eckert, Saskia Preissner, Robert Preissner:
CancerResource: a comprehensive database of cancer-relevant proteins and compound interactions supported by experimental knowledge. Nucleic Acids Res. 39(Database-Issue): 960-967 (2011) - [j30]Jessica Ahmed, Catherine L. Worth, Paul Florian Thaben, Christian Matzig, Corinna Blasse, Mathias Dunkel, Robert Preissner:
FragmentStore - a comprehensive database of fragments linking metabolites, toxic molecules and drugs. Nucleic Acids Res. 39(Database-Issue): 1049-1054 (2011) - [j29]Joachim von Eichborn, Manuela S. Murgueitio, Mathias Dunkel, Soeren Koerner, Philip E. Bourne, Robert Preissner:
PROMISCUOUS: a database for network-based drug-repositioning. Nucleic Acids Res. 39(Database-Issue): 1060-1066 (2011) - [j28]Catherine L. Worth, Robert Preissner, Tom L. Blundell:
SDM - a server for predicting effects of mutations on protein stability and malfunction. Nucleic Acids Res. 39(Web-Server-Issue): 215-222 (2011) - 2010
- [j27]Saskia Preissner, Katharina Kroll, Mathias Dunkel, Christian Senger, Gady Goldsobel, Daniel Kuzman, Stefan Günther, Rainer Winnenburg, Michael Schroeder, Robert Preissner:
SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions. Nucleic Acids Res. 38(Database-Issue): 237-243 (2010)
2000 – 2009
- 2009
- [j26]Raphael André Bauer, Kristian Rother, Peter Moor, Knut Reinert, Thomas Steinke, Janusz M. Bujnicki, Robert Preissner:
Fast Structural Alignment of Biomolecules Using a Hash Table, N-Grams and String Descriptors. Algorithms 2(2): 692-709 (2009) - [j25]Melanie Füllbeck, Nina Gebhardt, Julia Hossbach, Peter T. Daniel, Robert Preissner:
Computer-assisted identification of small-molecule Bcl-2 modulators. Comput. Biol. Chem. 33(6): 451-456 (2009) - [j24]Raphael André Bauer, Stefan Günther, Dominic Jansen, Carolin Heeger, Paul Florian Thaben, Robert Preissner:
SuperSite: dictionary of metabolite and drug binding sites in proteins. Nucleic Acids Res. 37(Database-Issue): 195-200 (2009) - [j23]Mathias Dunkel, Ulrike Schmidt, Swantje Struck, Lena Berger, Björn A. Grüning, Julia Hossbach, Ines S. Jaeger, Uta Effmert, Birgit Piechulla, Roger Eriksson, Jette Knudsen, Robert Preissner:
SuperScent - a database of flavors and scents. Nucleic Acids Res. 37(Database-Issue): 291-294 (2009) - [j22]Ulrike Schmidt, Swantje Struck, Björn A. Grüning, Julia Hossbach, Ines S. Jaeger, Roza Parol, Ulrike Lindequist, Eberhard Teuscher, Robert Preissner:
SuperToxic: a comprehensive database of toxic compounds. Nucleic Acids Res. 37(Database-Issue): 295-299 (2009) - [j21]Stefan Günther, Joachim von Eichborn, Patrick May, Robert Preissner:
JAIL: a structure-based interface library for macromolecules. Nucleic Acids Res. 37(Database-Issue): 338-341 (2009) - [j20]Kristian Rother, Peter Werner Hildebrand, Andrean Goede, Björn A. Grüning, Robert Preissner:
Voronoia: analyzing packing in protein structures. Nucleic Acids Res. 37(Database-Issue): 393-395 (2009) - [j19]Peter Werner Hildebrand, Andrean Goede, Raphael A. Bauer, Björn A. Grüning, Jochen Ismer, Elke Michalsky, Robert Preissner:
SuperLooper - a prediction server for the modeling of loops in globular and membrane proteins. Nucleic Acids Res. 37(Web-Server-Issue): 571-574 (2009) - 2008
- [j18]Stefan Günther, Michael Kuhn, Mathias Dunkel, Monica Campillos, Christian Senger, Evangelia Petsalaki, Jessica Ahmed, Eduardo Garcia Urdiales, Andreas Gewiess, Lars Juhl Jensen, Reinhard Schneider, Roman Skoblo, Robert B. Russell, Philip E. Bourne, Peer Bork, Robert Preissner:
SuperTarget and Matador: resources for exploring drug-target relationships. Nucleic Acids Res. 36(Database-Issue): 919-922 (2008) - [j17]Raphael A. Bauer, Philip E. Bourne, Arno Formella, Cornelius Frömmel, Christoph Gille, Andrean Goede, Aysam Guerler, Andreas Hoppe, Ernst-Walter Knapp, Thorsten Pöschel, Burghardt Wittig, Valentin Ziegler, Robert Preissner:
Superimposé: a 3D structural superposition server. Nucleic Acids Res. 36(Web-Server-Issue): 47-54 (2008) - [j16]Mathias Dunkel, Stefan Günther, Jessica Ahmed, Burghardt Wittig, Robert Preissner:
SuperPred: drug classification and target prediction. Nucleic Acids Res. 36(Web-Server-Issue): 55-59 (2008) - 2007
- [j15]Stefan Günther, Dorothea Hempel, Mathias Dunkel, Kristian Rother, Robert Preissner:
SuperHapten: a comprehensive database for small immunogenic compounds. Nucleic Acids Res. 35(Database-Issue): 906-910 (2007) - [c6]Stefan Günther, Stefanie Neumann, Jessica Ahmed, Robert Preissner:
Cellular Fingerprints: A Novel Concept for the Integration of Experimental Data and Compound-Target-Pathway Relations (Extended Abstract). BSB 2007: 167-170 - 2006
- [j14]Andrean Goede, Elke Michalsky, Ulrike Schmidt, Robert Preissner:
SuperMimic - Fitting peptide mimetics into protein structures. BMC Bioinform. 7: 11 (2006) - [j13]Stefan Günther, Christian Senger, Elke Michalsky, Andrean Goede, Robert Preissner:
Representation of target-bound drugs by computed conformers: implications for conformational libraries. BMC Bioinform. 7: 293 (2006) - [j12]Kristian Rother, Mathias Dunkel, Elke Michalsky, Silke Trißl, Andrean Goede, Ulf Leser, Robert Preissner:
A structural keystone for drug design. J. Integr. Bioinform. 3(1) (2006) - [j11]Mathias Dunkel, Melanie Füllbeck, Stefanie Neumann, Robert Preissner:
SuperNatural: a searchable database of available natural compounds. Nucleic Acids Res. 34(Database-Issue): 678-683 (2006) - 2005
- [j10]Andrean Goede, Mathias Dunkel, Nina Mester, Cornelius Frömmel, Robert Preissner:
SuperDrug: a conformational drug database. Bioinform. 21(9): 1751-1753 (2005) - [j9]Silke Trißl, Kristian Rother, Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, Ulf Leser:
Columba: an integrated database of proteins, structures, and annotations. BMC Bioinform. 6: 81 (2005) - [j8]Elke Michalsky, Mathias Dunkel, Andrean Goede, Robert Preissner:
SuperLigands - a database of ligand structures derived from the Protein Data Bank. BMC Bioinform. 6: 122 (2005) - [j7]Andrean Goede, Ines S. Jaeger, Robert Preissner:
SUPERFICIAL - Surface mapping of proteins via structure-based peptide library design. BMC Bioinform. 6: 223 (2005) - 2004
- [j6]Martin Thimm, Andrean Goede, Stefan Hougardy, Robert Preissner:
Comparison of 2D Similarity and 3D Superposition. Application to Searching a Conformational Drug Database. J. Chem. Inf. Model. 44(5): 1816-1822 (2004) - [c5]Kristian Rother, Heiko Müller, Silke Trißl, Ina Koch, Thomas Steinke, Robert Preissner, Cornelius Frömmel, Ulf Leser:
Columba: Multidimensional Data Integration of Protein Annotations. DILS 2004: 156-171 - 2003
- [j5]Kristian Rother, Robert Preissner, Andrean Goede, Cornelius Frömmel:
Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteins. Bioinform. 19(16): 2112-2121 (2003) - [j4]Cornelius Frömmel, Christoph Gille, Andrean Goede, Clemens Gröpl, Stefan Hougardy, Till Nierhoff, Robert Preissner, Martin Thimm:
Accelerating screening of 3D protein data with a graph theoretical approach. Bioinform. 19(18): 2442-2447 (2003) - 2001
- [j3]Robert Preissner, Andrean Goede, Kristian Rother, F. Osterkamp, U. Koert, Cornelius Frömmel:
Matching organic libraries with protein-substructures. J. Comput. Aided Mol. Des. 15(9): 811-817 (2001)
1990 – 1999
- 1999
- [j2]Robert Preissner, Andrean Goede, Cornelius Frömmel:
Homonyms and synonyms in the Dictionary of Interfaces in Proteins (DIP). Bioinform. 15(10): 832-836 (1999) - [c4]Christoph Gille, Andrean Goede, Kristian Rother, Robert Preissner, Cornelius Frömmel:
Interfaces of Secondary Structural Elements in Proteins - Evolution of Atomic Substructures -. German Conference on Bioinformatics 1999: 196 - 1998
- [c3]Christoph Gille, Andrean Goede, Robert Preissner, Cornelius Frömmel:
Atomic patch similarity as a criterion of evolutionary relationship between proteins. German Conference on Bioinformatics 1998 - [c2]Andrean Goede, Robert Preissner, Cornelius Frömmel:
A procedure for superposition of two arbitrary atomic arrangements. German Conference on Bioinformatics 1998 - [c1]Robert Preissner, Andrean Goede, Cornelius Frömmel:
Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patches. German Conference on Bioinformatics 1998 - 1997
- [j1]Andrean Goede, Robert Preissner, Cornelius Frömmel:
Voronoi cell: New method for allocation of space among atoms: Elimination of avoidable errors in calculation of atomic volume and density. J. Comput. Chem. 18(9): 1113-1123 (1997)
Coauthor Index
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