Parsoid/JS (and hence Parsoid/PHP) had metrics instrumentation in both the API layer as well as the transformation layers (that used to be called by the API).
Now that Parsoid/PHP is integrated into MediaWiki a bit more closely, a number of internal clients (like VE) no longer call the API layer and instead make direct calls to the Parsoid handling code in core.
At this time, this primarily impacts the html2wt transformations. Yesterday, VE switched away from using RESTBase (which in turn called the Parsoid API) to calling Parsoid directly. Since then, Parsoid's html2wt dashboard stopped recording all these html2wt calls because the instrumentation for some of the metrics lived in the REST API layer.
We should use this opportunity to think through what we want to instrument, what additional pieces of information we want to log, and fix the instrumentation to add new metrics to the Parsoid's library code.