ELIXIR’s Post

🔬 Curious about the latest advancements in sequencing accuracy? 🔬   Our team has redefined sequencing accuracy on the Element AVITI™ System, surpassing traditional standards and pushing the boundaries of precision.   🎯 Key Findings: 🔹 Traditionally, sequencing accuracy has been gauged by %Q30, representing data exceeding a 99.9% accuracy threshold. 🔹 We've achieved over 70% Q50 (99.999% accuracy) data on the AVITI system, showcasing a significant leap forward in precision. 🔹 This remarkable level of accuracy opens new doors for applications such as identifying low-frequency alleles and enhancing reference genomes.   Our success wasn't just about improving sequencing quality. We've also tackled challenges in library preparation errors and analysis artifacts, ensuring robust and reliable results.   Ready to Shift Your Science? Download our scientific poster to explore the methodologies and insights behind our achievement: https://bit.ly/3J4Dh1z #ElemBio #AVITI #Sequencing #Genomics #ResearchInnovation #PrecisionScience #ShiftYourScience

Research tools offered by companies have been a great help to advance science... however, now we want to correlate those results with new ones gained through Omics. I explore a phospho kit from #biotechne in this video and its compatibility with FAIR data principles https://lnkd.in/egQhsMkT

I’m happy to announce the publication of a new paper from the H2020 BovReg EU project, where I had the opportunity to contribute as a co-author. This collaborative effort resulted in the development of an innovative bioinformatics pipeline using Nextflow with DSL2 syntax for detecting expression quantitative trait loci (eQTL). As the volume of Next-Generation Sequencing (NGS) data continues to grow, orchestrating bioinformatic workflows has become increasingly complex. Our pipeline addresses these challenges, facilitating efficient collaboration among various partners involved in eQTL studies. Based on pilot data tests, the new pipeline is designed for large-scale analyses, ensuring the sharing of computational resources and overcoming data access limitations. I’m excited about the potential impact this work could have on future eQTL studies! https://lnkd.in/dpYQPTrZ #Bioinformatics #NGS #Nextflow #eQTL #Genomics #BovReg #H2020

🚀 Discover the next generation of multiomics with AVITI24™. 🧬An integrated biology platform, #AVITI24 empowers sequencing and in situ #multiomic analysis providing deep insights. With multiple read-outs, flexible experimental design, and compatibility with diverse analyses, the possibilities are limitless. 🌟 Download our #infographic and learn how AVITI24 can transform your research and unlock complex biological insights https://bit.ly/4g7024e

🔬 Embracing the power of reference libraries! 🔍 Excited to share insights from Christina Pavloudi on the critical role of reference libraries in #eDNA implementation for #biomonitoring and #AquaticResearch. 🌊 Dive into the conversation and discover how these resources amplify our understanding of #biodiversity and drive impactful scientific discoveries. #Science #eDNAquaPlan

🚨 New publication co-authored by Lygature: "Sharing sensitive data in life sciences: An overview of centralised and federated approaches," published in Oxford Journals Briefings in #Bioinformatics The paper is the outcome of a workshop organised by Lygature under the EOSC-Life project. Commenting on the new publication, Lygature Program Manager and co-author, Jan-Willem Boiten said: "Central repositories for data sharing in European research face challenges, especially with sensitive health data. Federated approaches, where data remains at the source, are increasingly preferred. Our paper discusses the key considerations for choosing between central, federated, or hybrid data storage strategies for large-scale European collaborations." 📖 Read the paper here 👉 https://lnkd.in/d5NbeXfM ECRIN (European Clinical Research Infrastructure Network), BBMRI-ERIC, EATRIS, ERINHA, Istituto Mario Negri, Health Data Hub, European Bioinformatics Institute | EMBL-EBI, EBRAINS, eCREAM, ISIDORe, Ilse Custers, Rick van Nuland 

Step into the world of streamlined #bioinformatics with Dr. Stefanie Morgan, Head of Scientific Solutions at Watershed Bio and Adam Stasio, President of SciMed. Stefanie shares insights from the forefront of technology, exploring the innovative ways Watershed Bio is shaping the landscape of data-driven decision-making in scientific research. Listen here: https://lnkd.in/eQGqBiw3

Such an insightful course. Highly recommend!!

📢 Come and join us at University of Luxembourg for this exciting course on integrated #meta #omics for #microbiome analyses! #metagenomics #metatranscriptomics #metaproteomics #metabolomics #data #integration #machinelearning #AI

🥁 “Recognized by nearly 50 citations since its publication, this work has significantly contributed to the field of life science by providing a meticulously organized, readily accessible, and freely available dataset of protein clusters.”  ‘Clustering the universe of AI-predicted protein structures’ is one of the #SIBRemarkableOutputs 2023 👏This work joins the yearly list of outstanding contributions from SIB Members across Switzerland to the field of #bioinformatics. 👉 Find out more about this and the other outputs: https://lnkd.in/eP4FW9ib #alphafold #proteinsinteractions #Proteinanalysis #Structuralbiology 💡The SIB Remarkable Outputs gather on a shortlist the most outstanding works produced by SIB members each year. These contributions showcase the latest advances in the Swiss bioinformatics field and include innovative solutions to share with the life science community. BioAlps - Swiss Health Valley, ELIXIR, Life Sciences Switzerland (LS2) Luciano Cascione Laurent Falquet Robert Ivánek Charlotte Soneson Patricia Palagi Graf Frederique Lisacek Robert Waterhouse Pedro Beltrao, Seoul National University, ETH Zürich, EMBL, Martin Steinegger