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View profile for Tyler Sloan, graphic

PhD scientist and data visualization specialist

My latest #neuro #visualization is an intuition pump to help us appreciate the intricate interconnectivity of cells in your #brain.  We begin by peeling through the #MICrONS cubic millimeter of mouse visual cortex, where ~75,000 neurons are packed tightly. We then see the layered organization of the cerebral cortex, segmented by their inputs and outputs. While the inputs and outputs are designated to distinct (horizontal) layers, the brain is functionally organized by vertical ‘columns’ through all these layers. Each column is a modular, computational unit, that processes and responds to one specific type of information. We take a moment to appreciate  the coordinated firing of a sample of functionally-matched neurons from within a cortical minicolumn. We then zoom in from the level of the circuit to the level of the synapse, onto a layer 5 Pyramidal neuron at the heart of the microcolumn, the principal excitation unit of the brain. This unremarkable pyramidal neuron has >11,000 input synapses. Its job is to integrate these inputs, and change its own output firing rate in response. Each glowing point is at the location of a synapse. For the synapses known to come from specific cortical layers, I’ve color coded these synapses, and animated them to flicker with juxtaposed activity data from the same type of cells elsewhere in the volume.  As the camera pans away, we appreciate the neuronal diversity inside this tissue - each of the neurons that pops in and out of view is a sample from the same volume that is confirmed to share a synapse with this pyramidal. Some cells hug it closely, some reach over to "high-five" from a distance. Thanks to the Allen Institute for their commitment to #openscience and making these impressive datasets openly available.

Rafael Suarez

CEO at New Royal Insurance

9mo

that's just amazing!! I would love to see Doctor Santiago Ramon y Cajal reaction to science like this!! . In 1894 Dr. Ramon y Cajal published the "Les nouvelles idées sur la fine anatomie des centres nerveux (New ideas on the fine anatomy of the nerve centres), a seminal work for the neuroanatomy science. He won the Nobel Prize in 1906. Santiago Ramón y Cajal died in Madrid on October 18, 1934 Thanks for sharing this impressive work.

Zhimei Du

Biopharma Executive | Research & Development to Commercialization | Biologics & Cell/Gene Therapy

9mo

Wow, it has taken us hundreds of years to understand the hardware of our brain, and it's already so amazing. Looking forward to overlaying it with the software part in the future, which will enable us to differentiate between species, individuals, and more.

Kevin Keenan

Senior Leadership | Solving Scientific Problems with Data-Centric Solutions | Team Building | Mentoring

9mo

An amazing means of displaying an enormous amount of information. This is a great example of how open data, data visualization techniques and data quality / annotation come together to provide incredible insights.

This is super cool!

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Corbin Ping

Neuroscience Researcher and Biomedical Engineer | System Engineer at MUSC Brain Stimulation Lab

9mo

Phenomenal visualization!! Really amazing to see this static object in action, fantastic work. This data set is my current computer background :)

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Francis Stawicki

Currently working at Abbott Labs as a member of their Networks Services Team leading network and infrastructure build outs for new commercial and manufacturing sites as well as life cycle refresh projects.

9mo

Very impressive processing. The data sets must be quite complex and the calculations intensive. Congratulations on the successful results.

Faezeh Jamshidi

| PhD Student | Neuro-SocioCultural Studies

9mo

It's wonderful

Manuel Rozas

CSO and Founder of Kura Biotech

9mo
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Nicolas Decat

PhD student working on sleep and consciousness | Scientific advisor | Scientific illustrator

9mo

Amazing work!

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