This year, scientists at Oak Ridge National Laboratory identified a key gene controlling root growth. Using a vast poplar dataset, they confirmed the molecular function of one hub gene, PtrXB38, and found that plants with the gene produced more prolific and deeper roots. Read more about this discovery and how it supports the development of better bioenergy crops and other plants that can thrive in difficult conditions: https://lnkd.in/gxUxSjEF #YearInReview #BigScience
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The Minimum Information about a Biosynthetic Gene cluster (MIBiG) database Established in 2015 and recently updated, MIBiG sets a global standard for annotating biosynthetic gene clusters (BGCs) and their products. Its online, open-access database now catalogs ~2,500 pathways, with contributions from 288 scientists worldwide. Updates include verified entries, biosynthesis steps, and evidence linking BGCs to metabolites. https://lnkd.in/diWPkfz3 via BIOGER #Metabolites #PlantMetabolites #Plants #Science #PlantScience #biosynthesis Image credit: MIBiG database
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suggest that some genes may have different symbols but share the same Ensembl ID. For example, the ARNTL2 gene is referred to as BMAL2 in the GTEx database despite both names corresponding to the same Ensembl ID. This situation suggests that using Ensembl IDs is more reliable for representing non-unique genes, as they provide a consistent identifier across various databases and studies.
Figure One Lab: A Gateway Computational Biology Experience | 1931 Code-Enabled Biologists and Counting
Ok I understand if the genes in an omics dataset from a publication is identified by Ensembl IDs. Or by human-readable gene symbols. Either way is fine. But why is it sometimes half and half? Just why would you share your data that way? #compbio #computationalbiology #bioinformatics
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Ok I understand if the genes in an omics dataset from a publication is identified by Ensembl IDs. Or by human-readable gene symbols. Either way is fine. But why is it sometimes half and half? Just why would you share your data that way? #compbio #computationalbiology #bioinformatics
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Did you know that TANGO2 is actually a gene? It is responsible for performing a very specific job in the body. The acronym that it stands for - Transport And Golgi Organization. Find out more by visiting our website. #TANGO2researchfoundation #TANGO2disease #RareDiseases
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Did you know that TANGO2 is actually a gene? It is responsible for performing a very specific job in the body. The acronym that it stands for - Transport And Golgi Organization. Find out more by visiting our website. #TANGO2researchfoundation #TANGO2disease #RareDiseases
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Interested in learning more about a specific bacterial host? Alissa Bleem discusses the Agile BioFoundry's genome engineering tools and ways they've been used to assign gene function, enhance biochemicals production, and more in this video: https://lnkd.in/gxJajhpw #biochemicals #GenomeEngineering #biomanufacturing #bioeconomy #GeneticTools
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Did you know TANGO2 is actually a gene? It plays a crucial role in our bodies, responsible for Transport And Golgi Organization. Want to dive deeper into the science behind TANGO2? Visit our website and discover more! #TANGO2researchfoundation #TANGO2 #TANGO2Disorder #RareDisease
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The Minimum Information about a Biosynthetic Gene cluster (MIBiG) database Established in 2015 and recently updated, MIBiG sets a global standard for annotating biosynthetic gene clusters (BGCs) and their products. Its online, open-access database now catalogs ~2,500 pathways, with contributions from 288 scientists worldwide. Updates include verified entries, biosynthesis steps, and evidence linking BGCs to metabolites. https://lnkd.in/ddH2Qu3p via BIOGER #Metabolites #PlantMetabolites #Plants #Science #PlantScience #biosynthesis Image credit: MIBiG database
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I'm delighted to share with you our latest preprint on anaerobic #benzene #biodegradation. Our team has identified a novel gene cluster whose products likely catalyze anaerobic benzene activation, an elusive and chemically difficult reaction. We hope to engage others to help us confirm the roles of these proteins and to search through their own cultures for similar features. https://lnkd.in/eD4GvBYM
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👋 Hi there! Want the latest on cutting-edge gene editing and more? Follow us for top updates and insights. Got questions? Feel free to message us! 🔬 #GeneEditing #PrimeEditing #EDITGENE #PrimeEditing #PointMutation #PrimeEditor #Lab #Biotechnology #CRISPRCas9 #CRISPR #GeneticResearch #Innovation #BingoPlatform #GeneticEngineering #HumanDiseases
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