SAFARI Research Group’s Post

Announcing a Milestone in My Master’s Research – Our Latest Paper and a Handy Tool for Researchers! 🌿 Thrilled to announce our latest paper, presented at IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2023 last December, is now published! This research marks a significant stride in understanding polyploid genomics. 🔬 Paper Title: "Inference of Subgenomes Resulting from Polyploid Events Using Synteny-Based Dynamic Linking and Maximum Neighbourhood" 🧬 Our paper introduces the innovative SyntenyLink algorithm. This tool automates subgenome reconstruction from synteny blocks in polyploid genomes, paving the way for deeper insights into plant evolution and genetics. 👩🔬 The SyntenyLink algorithm is not just a breakthrough in our understanding; it's a practical tool for researchers. Anyone working on separating subgenomes in polyploids can now access and use it. 🌐 Check out the tool here: https://lnkd.in/gny_Rw8D 🔗 https://lnkd.in/gif2WFrD 🤝 Grateful for my team's hard work and excited to see how the research community utilizes SyntenyLink in various genomic studies! #Bioinformatics #Genomics #Polyploidy #SyntenyLink #OpenSource #ResearchImpact #IEEEBIBM2023

🔬 Are you working on single-cell spatial and want to see how others tackle spatial data analysis? Join our webinar to learn from Holger Heyn's lab on how they are handling single-cell spatial whole transcriptome data for accurate and interpretable CosMx SMI results 👉https://lnkd.in/gcVcQKgt Discover AtoMx Spatial Informatics Platform, a cloud-based solution for spatial biology. No matter your computational experience, sign up to learn to analyze and visualize large spatial multiomics data. #SingleCell #SpatialBiology #DataAnalysis #Multiomics This post may include information regarding CosMx™ SMI products for RNA detection, which products are not available in the Federal Republic of Germany, as further described here: https://lnkd.in/gNX2ptVr

Exploring the Depths of Cellular Architecture: Integrating Spatial Discovery with Spatial Profiling. Delve into the intricate world of cellular biology as we uncover the significance of protein spatial organization. Discover how recent advancements in proteomic research have led to two powerful approaches, spatial discovery and spatial profiling, and explore the synergies that arise when these methods are combined. Read More: https://lnkd.in/gkS4tD-8 #Syncell #Proteomics #SpatialProfiling #SpatialDiscovery #ProteinResearch

Today's #interestingread is all about Molecular Pixelation: a DNA-sequencing based method for #singlecell analysis to quantify #protein abundance, #spatial distribution, and #colocalization of targeted proteins. In this paper, Pixelgen Technologies map out how Molecular Pixelation can help scientists to understand the spatial distribution of cell surface proteins, which governs vital biological processes such as inter-cell communication and mobility. Read the whole paper here 👉https://lnkd.in/eEGqVafQ 𝗪𝗮𝗻𝘁 𝘁𝗼 𝗹𝗲𝗮𝗿𝗻 𝗺𝗼𝗿𝗲 𝗮𝗯𝗼𝘂𝘁 𝘀𝗽𝗮𝘁𝗶𝗮𝗹 𝗼𝗺𝗶𝗰𝘀 𝘁𝗲𝗰𝗵𝗻𝗼𝗹𝗼𝗴𝗶𝗲𝘀? 💡 You're in luck: together with Pixelgen Technologies we are offering a webinar to answer your burning questions about how spatial #omics can deepen your biological understanding. 📆 Mark your calendar for May 29th, 15:00 CEST & register now for 𝗨𝗻𝗹𝗼𝗰𝗸𝗶𝗻𝗴 𝘁𝗵𝗲 𝘀𝗽𝗮𝘁𝗶𝗮𝗹 𝗱𝗶𝗺𝗲𝗻𝘀𝗶𝗼𝗻: 𝗠𝗮𝘅𝗶𝗺𝗶𝘇𝗶𝗻𝗴 𝗶𝗻𝘀𝗶𝗴𝗵𝘁𝘀 𝗳𝗿𝗼𝗺 𝘀𝗽𝗮𝘁𝗶𝗮𝗹 𝗼𝗺𝗶𝗰𝘀 𝗱𝗮𝘁𝗮 👉https://lnkd.in/eMiWYMN4

Synthetic biology is an interdisciplinary field that combines principles from biology, engineering, and computer science to design and construct new biological parts, devices, and systems with enhanced or novel functions. It involves the engineering of biological components, such as DNA sequences, genes, and proteins, to create synthetic organisms or modify existing ones for specific purposes. Watch our video on synthetic biology here, and learn more about how we work towards the future of health: https://lnkd.in/ej3BWXHW #IDOT #Technology #Automation #LifeSciences #LiquidHandling #LabAutomation #Development #DrugDiscovery #Genomics #SyntheticBiology #LaboratoryAutomation #FutureOfHealth

To all my #SpatialBiology and maybe some of my #DigitalPathology contacts.... this could be interesting

Synthetic biology is an interdisciplinary field that combines principles from biology, engineering, and computer science to design and construct new biological parts, devices, and systems with enhanced or novel functions. It involves the engineering of biological components, such as DNA sequences, genes, and proteins, to create synthetic organisms or modify existing ones for specific purposes. Read more about synthetic biology here: https://lnkd.in/eFgAXe73 #IDOT #Technology #Automation #LifeSciences #LiquidHandling #LabAutomation #Development #DrugDiscovery #Genomics #SyntheticBiology #LaboratoryAutomation #FutureOfHealth

Synthetic biology is an interdisciplinary field that combines principles from biology, engineering, and computer science to design and construct new biological parts, devices, and systems with enhanced or novel functions. It involves the engineering of biological components, such as DNA sequences, genes, and proteins, to create synthetic organisms or modify existing ones for specific purposes. Read more about synthetic biology here: https://lnkd.in/dK2kFGD7 #IDOT #Technology #Automation #LifeSciences #LiquidHandling #LabAutomation #Development #DrugDiscovery #Genomics #SyntheticBiology #LaboratoryAutomation #FutureOfHealth

Empowering advancements in human health with standardized tools, Standard BioTools will highlight their breakthroughs in microfluidics, cytometry, and imaging at Spatial Biology 2024! 🔧 📖 Explore the agenda: https://hubs.la/Q02jDpNY0 #OGOmics #SpatialBiologyUK24 #MassCytometry #TissueImaging

Synthetic biology is an interdisciplinary field that combines principles from biology, engineering, and computer science to design and construct new biological parts, devices, and systems with enhanced or novel functions. It involves the engineering of biological components, such as DNA sequences, genes, and proteins, to create synthetic organisms or modify existing ones for specific purposes. Read more about synthetic biology here: https://lnkd.in/g9S-HHDA #IDOT #Technology #Automation #LifeSciences #LiquidHandling #LabAutomation #Development #DrugDiscovery #Genomics #SyntheticBiology #LaboratoryAutomation #FutureOfHealth